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Information on SUBCLASS 3.8.9
Subclass Accession number: 1194
Subclass: 3.8.9 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 14.3 +/- 0.0
Average RMSD (Å) : 1.100 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: hXXcDXp
(φψ)-conformation: bpppbaa
Pattern: [CD]x[IV][AT][EF][DG][D][AK][ER][DS][V][DQ][AK][AK][GV][K][AY][AV]x[AD][AK]
Conservation:-0.112-0.8940.866-0.112-0.8940.0842.821-0.5030.0840.0841.2570.279-0.503-0.503-1.0892.039-0.503-0.307-0.894-0.698-0.503
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1edq_A_5111edq   A511531DLITFDDARSVQAKGKYVLDKEEEE---HHHHHHHHHHHHHHxbbbbbbaaaaaaaaaaaaaa
1o04_A_461o04   A4969CQVAEGDKEDVDKAVKAARAAEEEE-B-HHHHHHHHHHHHHHbxbpxxbaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o04_A_461o04   A     EDO1,2-ETHANEDIOL E - 46
1o04_A_461o04   A     EDO1,2-ETHANEDIOL V - 47
1o04_A_461o04   A     EDO1,2-ETHANEDIOL I - 48
1o04_A_461o04   A     GAIGUANIDINE R - 67

Clusters included in this Subclass
CLUSTER: EH.2.217