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Information on SUBCLASS 3.9.1
Subclass Accession number: 1195
Subclass: 3.9.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 9.5 +/- 14.0
Average RMSD (Å) : 0.929 +/- 0.160

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hXXXpXp
(φψ)-conformation: bpaabaa
Pattern: [gitv]xx[AFIVY][dpqst]xx[DHQS]x[ADER]x[alpvy]x[aekl]
Conservation:-0.103-0.5500.0421.183-0.161-0.841-0.6931.892-0.6602.123-0.591-0.842-0.694-0.106
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dp4_A_1821dp4   A185198HQEFVEGDPDHYPKEEEE-TT-GGGHHHbbxbbaabaaaaaa
1f6b_A_951f6b   A97110VFLVDCADHERLLEEEEEETT-GGGHHHbbxbxaabaaaaaa
1gs5_A_2321gs5   A232245VDIASWRHAEQLPAEEEEESS-GGGHHHbbbbxaabaaaaaa
1k87_A_3991k87   A400413GFVIQAYQKRCPLVEEEEETTBTTHHHHbbxbxaaxaaaaaa
1r8s_A_871r8s   A89102IFVVDSNDRERVNEEEEEETT-GGGHHHbbbbxaaxaaaaaa
1rlr_*_3021rlr   -303316TLFYPMWHLEVESLEEEEETTBTTHHHHbbbbpaaxaaaaaa
1vhc_A_431vhc   A4356VAEITFRSEAAADAEEEEETTSTTHHHHbbbxxaabaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f6b_A_951f6b   A     GDPGUANOSINE-5'-DIPHOSPHATE L - 99
1f6b_A_951f6b   A     GDPGUANOSINE-5'-DIPHOSPHATE D - 101
1k87_A_3991k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 402
1k87_A_3991k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 404
1k87_A_3991k87   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 406
1r8s_A_871r8s   A     GDPGUANOSINE-5'-DIPHOSPHATE V - 91
1r8s_A_871r8s   A     FMTFORMIC ACID L - 111

Clusters included in this Subclass
CLUSTER: EH.5.102
CLUSTER: EH.7.49