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Information on SUBCLASS 4.13.1
Subclass Accession number: 1271
Subclass: 4.13.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 9.6 +/- 14.4
Average RMSD (Å) : 0.900 +/- 0.224

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXXhpXp
(φψ)-conformation: bbppppaa
Pattern: xxx[aept][FILPV][DEHNPQS]x[deknsy]x[AIKLV][ADGKNQRT]
Conservation:-0.654-0.816-0.2571.0261.6241.135-1.672-0.378-0.2770.770-0.501
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b65_A_3551b65   A355365LVQAIDHERLREE----HHHHHbbxxpxaaaaa
1bg2_*_81bg2   -1424RFRPLNESEVNEE----HHHHHbxbxxxaaaaa
1em9_A_91em9   A1020AWTPLEPKLITEE----HHHHHbxbxxpaaaaa
1gpm_A_4821gpm   A484494HWAHLPYDFLGEE----HHHHHbxxxxpaaaaa
1qgw_A_381qgw   A4555TKVTVSESDAAEE----HHHHHbxxbbxaaaaa
1rif_A_1101rif   A110120KRIEPHWYQKDEE----HHHHHxxbbxxaaaaa
1ry6_A_21ry6   A717RKRPLSELEKKEE----HHHHHbxxxpxaaaaa
1st0_A_781st0   A8595EKTPFQVEQVAEE----HHHHHbxxwxbaaaaa
1us5_A_2041us5   A205215ALVAVDLNRIQEE----HHHHHbbxxbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE R - 14
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE F - 15
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE R - 16
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE P - 17
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE N - 19
1qgw_A_381qgw   A     DBV15,16-DIHYDROBILIVERDIN M - 38
1qgw_A_381qgw   A     PEBPHYCOERYTHROBILIN M - 38
1qgw_A_381qgw   A     DBV15,16-DIHYDROBILIVERDIN M - 39
1qgw_A_381qgw   A     PEBPHYCOERYTHROBILIN M - 39
1qgw_A_381qgw   A     PEBPHYCOERYTHROBILIN V - 40
1qgw_A_381qgw   A     DBV15,16-DIHYDROBILIVERDIN K - 41
1st0_A_781st0   A     GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE I - 83
1st0_A_781st0   A     GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE E - 85
1st0_A_781st0   A     YT3YTTRIUM (III) ION E - 92

Clusters included in this Subclass
CLUSTER: EH.4.79
CLUSTER: EH.5.100