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Information on SUBCLASS 4.2.1
Subclass Accession number: 1243
Subclass: 4.2.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 29

Average sequence ID (%) : 10.0 +/- 13.3
Average RMSD (Å) : 0.772 +/- 0.321

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hXXpXpXX
(φψ)-conformation: bbaappaa
Pattern: x[acfilvy][acgilmtv]xx[adegnst][adegnqst][dehnrsty]x[adegknrst]xxx
Conservation:0.2111.9681.219-0.512-0.7190.9000.322-0.175-0.9200.789-1.254-0.632-1.197
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a04_A_1051a04   A105117GYLLKDMEPEDLLEEEETT--HHHHHbbbxaaxxaaaaa
1bs0_A_1251bs0   A126138IAADRLSHASLLEEEEETT--HHHHHbbbpaapxaaaaa
1cl1_A_1031cl1   A104116VLMTNTAYEPSQDEEEETTS-HHHHHbbbxaaxpaaaaa
1cs1_A_931cs1   A94106LVAPHDCYGGSYREEEETT--HHHHHbbbxaaxpaaaaa
1e4m_M_4141e4m   M414424..TPGDENRNQSM..EETTS-HHHHH..bxaaxxaaaaa
1e79_A_2291e79   A232244VSATASDAAPLQYEEE-TTS-HHHHHbbbxaaxpaaaaa
1e79_D_2151e79   D218230VYGQMNEPPGARAEEE-TTS-HHHHHbbbxaaxxaaaaa
1eg5_A_911eg5   A92104IITTPIEHKAVLEEEE-TTS-HHHHHbbbbaaxxaaaaa
1elu_A_1061elu   A107119ILLTDCEHPGIIAEEEETT--HHHHHbbbxaaxxaaaaa
1euh_A_2551euh   A257269AIVLEDADLELTAEEE-TTS-HHHHHbxbxaaxxaaaaa
1ewk_A_2541ewk   A259271DKIYSNAGEKSFDEEE-TT--HHHHHbbbxaaxxaaaaa
1fc4_A_1281fc4   A129141IISDALNHASIIDEEEETT--HHHHHbbbxaapxaaaaa
1g62_A_241g62   A2436CLVAVGGSENFYSEEEETT--HHHHHbbbxaaxxaaaaa
1h7m_A_341h7m   A3547IIVARNARPDIKEEEEETTS-HHHHHbbbxaaxpaaaaa
1i0r_A_611i0r   A6577SVLELETPMEFIGEEEBTT--HHHHHbxxxaaxxaaaaa
1ibj_A_1731ibj   A174186IVAGDDVYGGSDREEEESS--HHHHHbbbpaappaaaaa
1jx6_A_3401jx6   A341353EIVTKADSPERIEEEEETTS-HHHHHbxbbaaxxaaaaa
1k3s_A_851k3s   A8595..LPQTSTEEEAL..EETTS-HHHHH..bpaaxxaaaaa
1nbw_B_861nbw   B8698ATGHVTDSDDQLREEEETTS-HHHHHbbbbaaxxaaaaa
1o04_A_2731o04   A275287NIIMSDADMDWAVEEE-TTS-HHHHHbbbxaaxxaaaaa
1o20_A_2271o20   A229241IFVDESADLKKAVEEE-TTS-HHHHHbbxxaapxaaaaa
1oyw_A_921oyw   A93105ACLNSTQTREQQLEEE-TTS-HHHHHbbbbaaxxaaaaa
1p3w_A_961p3w   A97109IITSKTEHKAVLDEEEETTS-HHHHHbbbbaaxxaaaaa
1p80_A_6021p80   A605617ILLNDEVRSADLLEE--TT--HHHHHbxxbaapxaaaaa
1qop_A_1531qop   A153164.ICPPNADDDLLR.EE-TT--HHHHH.xbxaNpxaaaaa
1qz9_A_1211qz9   A122134IVTETSNFPTDLYEEEETTS-HHHHHbxbbaaxpaaaaa
1su4_A_7161su4   A717729GIAMGSGTAVAKTEEEETTS-HHHHHxbbxaaxxaaaaa
1uzb_A_2931uzb   A295307IIVDETADFDLAAEEE-TTS-HHHHHbbbbaaxxaaaaa
1vec_A_1851vec   A186198MATTGGTNLRDDIEEE-SSS-HHHHHbbbbaapxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cl1_A_1031cl1   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) Y - 111
1cl1_A_1031cl1   A     BCTBICARBONATE ION Y - 111
1cl1_A_1031cl1   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) S - 114
1cs1_A_931cs1   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) Y - 101
1cs1_A_931cs1   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) S - 104
1eg5_A_911eg5   A     MSESELENOMETHIONINE I - 92
1eg5_A_911eg5   A     MSESELENOMETHIONINE I - 93
1eg5_A_911eg5   A     MSESELENOMETHIONINE T - 94
1eg5_A_911eg5   A     MSESELENOMETHIONINE T - 95
1eg5_A_911eg5   A     MSESELENOMETHIONINE I - 97
1eg5_A_911eg5   A     MSESELENOMETHIONINE E - 98
1eg5_A_911eg5   A     MSESELENOMETHIONINE H - 99
1eg5_A_911eg5   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 99
1eg5_A_911eg5   A     MSESELENOMETHIONINE A - 101
1eg5_A_911eg5   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 101
1eg5_A_911eg5   A     MSESELENOMETHIONINE V - 102
1eg5_A_911eg5   A     MSESELENOMETHIONINE L - 103
1eg5_A_911eg5   A     MSESELENOMETHIONINE E - 104
1elu_A_1061elu   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID C - 112
1elu_A_1061elu   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID E - 113
1elu_A_1061elu   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID H - 114
1elu_A_1061elu   A     CSSS-MERCAPTOCYSTEINE H - 114
1elu_A_1061elu   A     CSSS-MERCAPTOCYSTEINE P - 115
1elu_A_1061elu   A     CSSS-MERCAPTOCYSTEINE G - 116
1elu_A_1061elu   A     PDA2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID I - 117
1ewk_A_2541ewk   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID Y - 262
1ewk_A_2541ewk   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID S - 263
1ewk_A_2541ewk   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID N - 264
1fc4_A_1281fc4   A     MSESELENOMETHIONINE D - 132
1fc4_A_1281fc4   A     AKB2-AMINO-3-KETOBUTYRIC ACID H - 136
1fc4_A_1281fc4   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 136
1fc4_A_1281fc4   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 138
1fc4_A_1281fc4   A     MSESELENOMETHIONINE I - 139
1fc4_A_1281fc4   A     PLPPYRIDOXAL-5'-PHOSPHATE I - 139
1i0r_A_611i0r   A     FMNFLAVIN MONONUCLEOTIDE I - 76
1i0r_A_611i0r   A     FMNFLAVIN MONONUCLEOTIDE F - 79
1i0r_A_611i0r   A     FMNFLAVIN MONONUCLEOTIDE G - 80
1ibj_A_1731ibj   A     CO3CARBONATE ION Y - 181
1ibj_A_1731ibj   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 181
1ibj_A_1731ibj   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 184
1k3s_A_851k3s   A     MSESELENOMETHIONINE L - 85
1k3s_A_851k3s   A     MSESELENOMETHIONINE E - 93
1k3s_A_851k3s   A     MSESELENOMETHIONINE A - 94
1k3s_A_851k3s   A     MSESELENOMETHIONINE L - 95
1k3s_A_851k3s   A     MSESELENOMETHIONINE G - 97
1k3s_A_851k3s   A     MSESELENOMETHIONINE F - 98
1k3s_A_851k3s   A     MSESELENOMETHIONINE E - 99
1k3s_A_851k3s   A     MSESELENOMETHIONINE F - 101
1k3s_A_851k3s   A     MSESELENOMETHIONINE K - 109
1k3s_A_851k3s   A     MSESELENOMETHIONINE Y - 112
1oyw_A_921oyw   A     MSESELENOMETHIONINE C - 94
1oyw_A_921oyw   A     MSESELENOMETHIONINE N - 96
1oyw_A_921oyw   A     MSESELENOMETHIONINE Q - 99
1oyw_A_921oyw   A     MSESELENOMETHIONINE R - 101
1oyw_A_921oyw   A     MSESELENOMETHIONINE Q - 103
1oyw_A_921oyw   A     MSESELENOMETHIONINE Q - 104
1oyw_A_921oyw   A     MSESELENOMETHIONINE L - 105
1oyw_A_921oyw   A     MSESELENOMETHIONINE E - 106
1p3w_A_961p3w   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 104
1p3w_A_961p3w   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 106
1qop_A_1531qop   A     IPLINDOLE-3-PROPANOL PHOSPHATE I - 153
1qz9_A_1211qz9   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 128
1qz9_A_1211qz9   A     PLPPYRIDOXAL-5'-PHOSPHATE F - 129
1qz9_A_1211qz9   A     P3G3,6,9,12,15-PENTAOXAHEPTADECANE F - 129
1qz9_A_1211qz9   A     P3G3,6,9,12,15-PENTAOXAHEPTADECANE P - 130
1qz9_A_1211qz9   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 131
1qz9_A_1211qz9   A     P3G3,6,9,12,15-PENTAOXAHEPTADECANE T - 131
1qz9_A_1211qz9   A     PLPPYRIDOXAL-5'-PHOSPHATE D - 132
1qz9_A_1211qz9   A     PLPPYRIDOXAL-5'-PHOSPHATE I - 135
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1a04_A_1051a04   A 1PHOSPHORYLATION SITE.K - 109

Clusters included in this Subclass
CLUSTER: EH.3.32
CLUSTER: EH.4.251
CLUSTER: EH.4.9
CLUSTER: EH.6.24