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Information on SUBCLASS 4.42.1
Subclass Accession number: 1339
Subclass: 4.42.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.183.4 (>75 %)  3.4.19 (>75 %)  3.4.19.35.3 (>75 %)  5.3.1 (>75 %)  
GO : GO:0004219 (>75 %)  GO:0004364 (>75 %)  GO:0008233 (>75 %)  GO:0008234 (>75 %)  GO:0008238 (>75 %)  GO:0008242 (>75 %)  GO:0016765 (>75 %)  GO:0016853 (>50 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)  
SCOP : 52832 (>75 %)  52833 (>75 %)  52862 (>75 %)  53162 (>75 %)  53182 (>75 %)  53183 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 42.5 +/- 23.0
Average RMSD (Å) : 0.225 +/- 0.050

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: YhchpGXh
(φψ)-conformation: bppbaeaa
Pattern: [IKV][L]x[Y][FW][DKN][AIM][KR][G]x[AMV][EQ]x[IT][R][LWY][IL][FL][AE][AY]
Conservation:-1.0170.690-1.2002.3100.875-0.354-0.8520.4841.770-0.762-0.7200.484-1.436-0.4811.230-0.5550.156-0.162-0.4830.021
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dug_A_31dug   A322ILGYWKIKGLVQPTRLLLEYEEEEESSSGGGHHHHHHHHHbbbbxxbaeaaaaaaaaaaa
1iyh_A_41iyh   A524KLTYFNMRGRAEIIRYIFAYEEEEESSSGGGHHHHHHHHHbxbbxxbaeaaaaaaaaaaa
1k3y_A_61k3y   A625KLHYFNARGRMESTRWLLAAEEEEESSSTTTHHHHHHHHHbxbbxxbaeaaaaaaaaaaa
1okt_A_51okt   A625VLYYFDARGKAELIRLIFAYEEEEESSSTTTHHHHHHHHHbbbbxxbaeaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dug_A_31dug   A     GSHGLUTHATHIONE Y - 6
1dug_A_31dug   A     GSHGLUTHATHIONE W - 7
1dug_A_31dug   A     GSHGLUTHATHIONE L - 12
1iyh_A_41iyh   A     GSHGLUTHATHIONE Y - 8
1iyh_A_41iyh   A     GSHGLUTHATHIONE F - 9
1iyh_A_41iyh   A     GSHGLUTHATHIONE G - 13
1iyh_A_41iyh   A     GSHGLUTHATHIONE R - 14
1k3y_A_61k3y   A     GTXS-HEXYLGLUTATHIONE Y - 9
1k3y_A_61k3y   A     GTXS-HEXYLGLUTATHIONE F - 10
1k3y_A_61k3y   A     GTXS-HEXYLGLUTATHIONE G - 14
1k3y_A_61k3y   A     GTXS-HEXYLGLUTATHIONE R - 15
1k3y_A_61k3y   A     GOLGLYCEROL R - 15
1k3y_A_61k3y   A     GOLGLYCEROL S - 18
1okt_A_51okt   A     FMTFORMIC ACID F - 10
1okt_A_51okt   A     FMTFORMIC ACID K - 15
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1okt_A_51okt   A AC1FMT BINDING SITE FOR CHAIN AK - 15

Clusters included in this Subclass
CLUSTER: EH.5.115