Information on SUBCLASS 4.42.1 |
Subclass Accession number: 1339
Subclass: 4.42.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.183.4 (>75 %) 3.4.19 (>75 %) 3.4.19.35.3 (>75 %) 5.3.1 (>75 %) GO : GO:0004219 (>75 %) GO:0004364 (>75 %) GO:0008233 (>75 %) GO:0008234 (>75 %) GO:0008238 (>75 %) GO:0008242 (>75 %) GO:0016765 (>75 %) GO:0016853 (>50 %) GO:0016860 (>75 %) GO:0016861 (>75 %) SCOP : 52832 (>75 %) 52833 (>75 %) 52862 (>75 %) 53162 (>75 %) 53182 (>75 %) 53183 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 42.5 +/- 23.0 Average RMSD (Å) : 0.225 +/- 0.050 Consensus geometry
|
Consensus Sequence: | YhchpGXh |
(φψ)-conformation: | bppbaeaa |
Pattern: | [IKV] | [L] | x | [Y] | [FW] | [DKN] | [AIM] | [KR] | [G] | x | [AMV] | [EQ] | x | [IT] | [R] | [LWY] | [IL] | [FL] | [AE] | [AY] |
Conservation: | -1.017 | 0.690 | -1.200 | 2.310 | 0.875 | -0.354 | -0.852 | 0.484 | 1.770 | -0.762 | -0.720 | 0.484 | -1.436 | -0.481 | 1.230 | -0.555 | 0.156 | -0.162 | -0.483 | 0.021 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dug_A_3 | 1dug | A | 3 | 22 | ILGYWKIKGLVQPTRLLLEY | EEEEESSSGGGHHHHHHHHH | bbbbxxbaeaaaaaaaaaaa |
1iyh_A_4 | 1iyh | A | 5 | 24 | KLTYFNMRGRAEIIRYIFAY | EEEEESSSGGGHHHHHHHHH | bxbbxxbaeaaaaaaaaaaa |
1k3y_A_6 | 1k3y | A | 6 | 25 | KLHYFNARGRMESTRWLLAA | EEEEESSSTTTHHHHHHHHH | bxbbxxbaeaaaaaaaaaaa |
1okt_A_5 | 1okt | A | 6 | 25 | VLYYFDARGKAELIRLIFAY | EEEEESSSTTTHHHHHHHHH | bbbbxxbaeaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dug_A_3 | 1dug | A | GSHGLUTHATHIONE | Y - 6 |
1dug_A_3 | 1dug | A | GSHGLUTHATHIONE | W - 7 |
1dug_A_3 | 1dug | A | GSHGLUTHATHIONE | L - 12 |
1iyh_A_4 | 1iyh | A | GSHGLUTHATHIONE | Y - 8 |
1iyh_A_4 | 1iyh | A | GSHGLUTHATHIONE | F - 9 |
1iyh_A_4 | 1iyh | A | GSHGLUTHATHIONE | G - 13 |
1iyh_A_4 | 1iyh | A | GSHGLUTHATHIONE | R - 14 |
1k3y_A_6 | 1k3y | A | GTXS-HEXYLGLUTATHIONE | Y - 9 |
1k3y_A_6 | 1k3y | A | GTXS-HEXYLGLUTATHIONE | F - 10 |
1k3y_A_6 | 1k3y | A | GTXS-HEXYLGLUTATHIONE | G - 14 |
1k3y_A_6 | 1k3y | A | GTXS-HEXYLGLUTATHIONE | R - 15 |
1k3y_A_6 | 1k3y | A | GOLGLYCEROL | R - 15 |
1k3y_A_6 | 1k3y | A | GOLGLYCEROL | S - 18 |
1okt_A_5 | 1okt | A | FMTFORMIC ACID | F - 10 |
1okt_A_5 | 1okt | A | FMTFORMIC ACID | K - 15 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1okt_A_5 | 1okt | A | AC1FMT BINDING SITE FOR CHAIN A | K - 15 |
Clusters included in this Subclass |
CLUSTER: EH.5.115 |