Logo
Information on SUBCLASS 4.6.2
Subclass Accession number: 3072
Subclass: 4.6.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 11.3 +/- 13.3
Average RMSD (Å) : 0.875 +/- 0.276

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXXXpXX
(φψ)-conformation: bbapapaa
Pattern: x[aikltv]x[ADGPT]xx[DNS][eprs][adv][ADGQT][afikv]x
Conservation:-0.041-0.270-0.5900.097-0.689-0.6862.802-0.0790.8500.049-0.701-0.743
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cfy_A_381cfy   A4354ETSTDPSYDAFLEEE----HHHHHbbbaxaxaaaaa
1dc1_A_2351dc1   A240251ELKGGIDPAGADEEE----HHHHHbbbaxaxaaaaa
1dvj_A_151dvj   A1728LAMDLMNRDDALEEE--SSHHHHHxxxaxabaaaaa
1jbw_A_3101jbw   A311322VIDGAHNPDGINEEE---SHHHHHbbbaxNbaaaaa
1jet_A_2201jet   A222233TYLPISSEVTDVEEE----HHHHHbbbaxaxaaaaa
1ln4_A_461ln4   A4960VKIATEDRETKTEEE----HHHHHbxbapaxaaaaa
1mdb_A_2521mdb   A254265VLSPSPSPDDAFEE-SSSSHHHHHbxxabapaaaaa
1un8_A_2261un8   A226237SVIDTQNSAQVVEEES---HHHHHbbxabapaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dvj_A_151dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE A - 18
1dvj_A_151dvj   A     UP66-AZA URIDINE 5'-MONOPHOSPHATE D - 20
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER D - 313
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 314
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER A - 315
1jbw_A_3101jbw   A     MGMAGNESIUM ION H - 316
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER H - 316
1jbw_A_3101jbw   A     MGMAGNESIUM ION N - 317
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER N - 317
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER D - 319
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 320
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER I - 321
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER G - 323
1jbw_A_3101jbw   A     ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER L - 324
1jet_A_2201jet   A     IUMURANYL (VI) ION V - 230

Clusters included in this Subclass
CLUSTER: EH.3.134
CLUSTER: EH.5.62