Information on SUBCLASS 4.62.1 |
Subclass Accession number: 3171
Subclass: 4.62.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0000287 (>75 %) SCOP : 100948 (>75 %) 52498 (>75 %) 52499 (>75 %) 52517 (>75 %) 52518 (>75 %) 88749 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 30.3 +/- 16.5 Average RMSD (Å) : 0.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | GhXXphhV |
(φψ)-conformation: | ebwaaFaa |
Pattern: | [QRT] | [ILV] | [VY] | [IL] | [C] | [G] | [IV] | x | [AT] | [EHN] | [IVY] | [CG] | [V] | x | x | [ST] | [AT] | x | [DN] | [A] | [LWY] | [EKS] |
Conservation: | -0.690 | -0.047 | -0.355 | 0.165 | 3.284 | 1.706 | 0.411 | -0.923 | -0.115 | -0.222 | -0.456 | -0.283 | 0.654 | -1.216 | -0.982 | 0.129 | -0.253 | -1.157 | 0.491 | 0.654 | -0.281 | -0.514 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1im5_A_122 | 1im5 | A | 122 | 143 | RVYICGVATEYCVRATALDALK | EEEEEEE-TTTHHHHHHHHHHH | bbbbbebwaaFaaaaaaaaaaa |
1j2r_A_134 | 1j2r | A | 134 | 155 | TIVLCGISTNIGVESTARNAWE | EEEEEEE-TTTHHHHHHHHHHH | bbxbbebwaaaaaaaaaaaaaa |
1nf9_A_144 | 1nf9 | A | 144 | 165 | QLVLCGVYAHVGVLISTVDAYS | EEEEEEE-TTTHHHHHHHHHHH | bbbbbebwaaFaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j2r_A_134 | 1j2r | A | MPD2-METHYL-2,4-PENTANEDIOL | I - 140 |
1j2r_A_134 | 1j2r | A | MPD2-METHYL-2,4-PENTANEDIOL | S - 141 |
1j2r_A_134 | 1j2r | A | MPD2-METHYL-2,4-PENTANEDIOL | I - 144 |
1j2r_A_134 | 1j2r | A | MPD2-METHYL-2,4-PENTANEDIOL | G - 145 |
1j2r_A_134 | 1j2r | A | MPD2-METHYL-2,4-PENTANEDIOL | W - 154 |
1nf9_A_144 | 1nf9 | A | BOGB-OCTYLGLUCOSIDE | H - 153 |
1nf9_A_144 | 1nf9 | A | BOGB-OCTYLGLUCOSIDE | L - 157 |
Clusters included in this Subclass |
CLUSTER: EH.5.339 |