Information on SUBCLASS 4.79.1 |
Subclass Accession number: 3188
Subclass: 4.79.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0016829 (>50 %) GO:0016846 (>50 %) SCOP : 53382 (>75 %) 53383 (>75 %) 53402 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 24.0 +/- 16.7 Average RMSD (Å) : 0.467 +/- 0.153 Consensus geometry
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Consensus Sequence: | hphhXhpp |
(φψ)-conformation: | bbapbpaa |
Pattern: | x | [R] | [IL] | [NS] | [ALY] | [AG] | [ACT] | [AP] | [RSY] | [ES] | [KV] | [IL] | [EQ] | [EK] | [AGS] | [LMV] | [ADE] | [GR] | [LM] | x | [KNR] | [AV] | [IL] | [KR] | [ADE] |
Conservation: | -0.894 | 2.446 | 0.667 | 1.011 | -1.456 | 0.056 | -0.532 | 0.543 | -1.559 | -0.058 | -0.621 | 0.679 | 1.181 | 0.736 | -0.532 | -0.018 | -0.840 | -0.425 | 0.791 | -1.867 | -0.121 | -0.177 | 0.667 | 1.164 | -0.840 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c7n_A_367 | 1c7n | A | 368 | 392 | ERINLAAPSSVIQESLERLNKALKD | EEEE--S-HHHHHHHHHHHHHHHHH | bbbxaxbxaaaaaaaaaaaaaaaaa |
1d2f_A_363 | 1d2f | A | 364 | 388 | VRLNAGCPRSKLEKGVAGLINAIRA | EEEE--S-HHHHHHHHHHHHHHHHH | bbbxaxbxaaaaaaaaaaaaaaaaa |
1gde_A_361 | 1gde | A | 361 | 385 | VRISYATAYEKLEEAMDRMERVLKE | EEEE--S-HHHHHHHHHHHHHHHHH | bxbbaxbpaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c7n_A_367 | 1c7n | A | PLPPYRIDOXAL-5'-PHOSPHATE | R - 369 |
1gde_A_361 | 1gde | A | GLUGLUTAMIC ACID | R - 362 |
1gde_A_361 | 1gde | A | PLPPYRIDOXAL-5'-PHOSPHATE | R - 362 |
Clusters included in this Subclass |
CLUSTER: EH.3.152 |