Information on SUBCLASS 5.17.1 |
Subclass Accession number: 1407
Subclass: 5.17.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.8 GO : GO:0004553 (>75 %) GO:0016614 (>50 %) GO:0016616 (>50 %) GO:0016798 (>75 %) GO:0030246 (>75 %) GO:0046914 (>75 %) SCOP : 51445 (>75 %) 51487 (>75 %) 51734 (>75 %) 51735 (>75 %) 51751 (>75 %) |
Number of loops: 6 Average sequence ID (%) : 10.0 +/- 13.2 Average RMSD (Å) : 1.067 +/- 0.258 Consensus geometry
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Consensus Sequence: | XXXXXXpXp |
(φψ)-conformation: | bbpbppbaa |
Pattern: | [aikv] | [fltv] | x | [aefkm] | x | [dpsv] | x | [hnty] | x | [DEKN] | [dnv] | x | x | [EKP] | [il] | [afilv] |
Conservation: | -0.161 | -0.016 | -0.462 | -0.834 | -0.890 | -0.462 | -0.304 | 0.151 | -0.982 | 1.763 | -0.288 | -0.670 | -0.620 | 2.515 | 1.277 | -0.016 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_A_615 | 1a9x | A | 615 | 630 | RLYFEPVTLEDVLEIV | EEE----SHHHHHHHH | bbbxbxxbaaaaaaaa |
1a9x_A_63 | 1a9x | A | 63 | 78 | ATYIEPIHWEVVRKII | EEE-S---HHHHHHHH | bbbxbpxbaaaaaaaa |
1f14_A_103 | 1f14 | A | 104 | 119 | VVEAIVENLKVKNELF | EEE---S-HHHHHHHH | bbxbbpxbaaaaaaaa |
1h7w_A_636 | 1h7w | A | 639 | 654 | ASIMCSYNKNDWMELS | EEE---S-HHHHHHHH | xxbbbxxbaaaaaaaa |
1r7a_A_228 | 1r7a | A | 229 | 244 | ILIEVHSYYKKQVEIA | EEE---S-HHHHHHHH | bbbxbbbpaaaaaaaa |
1r89_A_277 | 1r89 | A | 282 | 297 | KFRKPDIVDDNLYPQL | EEE--S--HHHHHHHH | bbxxxxbxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h7w_A_636 | 1h7w | A | FMNFLAVIN MONONUCLEOTIDE | S - 640 |
1r7a_A_228 | 1r7a | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | E - 232 |
1r7a_A_228 | 1r7a | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | H - 234 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 299 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | K - 303 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | E - 306 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | F - 307 |
1r89_A_277 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 310 |
Clusters included in this Subclass |
CLUSTER: EH.5.60 |
CLUSTER: EH.6.93 |