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Information on SUBCLASS 5.17.1
Subclass Accession number: 1407
Subclass: 5.17.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.8
GO : GO:0004553 (>75 %)  GO:0016614 (>50 %)  GO:0016616 (>50 %)  GO:0016798 (>75 %)  GO:0030246 (>75 %)  GO:0046914 (>75 %)  
SCOP : 51445 (>75 %)  51487 (>75 %)  51734 (>75 %)  51735 (>75 %)  51751 (>75 %)  
Number of loops: 6

Average sequence ID (%) : 10.0 +/- 13.2
Average RMSD (Å) : 1.067 +/- 0.258

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXXXXpXp
(φψ)-conformation: bbpbppbaa
Pattern: [aikv][fltv]x[aefkm]x[dpsv]x[hnty]x[DEKN][dnv]xx[EKP][il][afilv]
Conservation:-0.161-0.016-0.462-0.834-0.890-0.462-0.3040.151-0.9821.763-0.288-0.670-0.6202.5151.277-0.016
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_A_6151a9x   A615630RLYFEPVTLEDVLEIVEEE----SHHHHHHHHbbbxbxxbaaaaaaaa
1a9x_A_631a9x   A6378ATYIEPIHWEVVRKIIEEE-S---HHHHHHHHbbbxbpxbaaaaaaaa
1f14_A_1031f14   A104119VVEAIVENLKVKNELFEEE---S-HHHHHHHHbbxbbpxbaaaaaaaa
1h7w_A_6361h7w   A639654ASIMCSYNKNDWMELSEEE---S-HHHHHHHHxxbbbxxbaaaaaaaa
1r7a_A_2281r7a   A229244ILIEVHSYYKKQVEIAEEE---S-HHHHHHHHbbbxbbbpaaaaaaaa
1r89_A_2771r89   A282297KFRKPDIVDDNLYPQLEEE--S--HHHHHHHHbbxxxxbxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h7w_A_6361h7w   A     FMNFLAVIN MONONUCLEOTIDE S - 640
1r7a_A_2281r7a   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL E - 232
1r7a_A_2281r7a   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL H - 234
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE R - 299
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE K - 303
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE E - 306
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE F - 307
1r89_A_2771r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE R - 310

Clusters included in this Subclass
CLUSTER: EH.5.60
CLUSTER: EH.6.93