Information on SUBCLASS 5.17.1 |
Subclass Accession number: 3247
Subclass: 5.17.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 45.6 +/- 25.7 Average RMSD (Å) : 0.293 +/- 0.116 Consensus geometry
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Consensus Sequence: | hhTGhXpGh |
(φψ)-conformation: | bbplaabea |
Pattern: | [ACTV] | [ACV] | [ILV] | [ILTV] | [T] | [G] | [ACGS] | [AGNST] | [agknrst] | [GR] | [FILV] | [G] | x | [aegs] | [ilmvy] | [AV] | x | [adekqrst] | [FL] | [acglv] |
Conservation: | -0.291 | -0.182 | 0.311 | 0.122 | 1.593 | 2.124 | -0.381 | -0.435 | -0.990 | 0.826 | 0.167 | 2.124 | -0.981 | -0.713 | -0.371 | 0.111 | -1.139 | -1.082 | 0.213 | -1.025 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ae1_A_23 | 1ae1 | A | 23 | 42 | TALVTGGSKGIGYAIVEELA | EEEEES-SSHHHHHHHHHHH | bbbbxvaabeaaaaaaaaaa |
1edo_A_19 | 1edo | A | 19 | 38 | VVVVTGASRGIGKAIALSLG | EEEETT-SSHHHHHHHHHHH | xbbbxvaabeaaaaaaaaaa |
1fmc_A_13 | 1fmc | A | 13 | 32 | CAIITGAGAGIGKEIAITFA | EEEETTTTSHHHHHHHHHHH | bbbbxlaabeaaaaaaaaaa |
1g0o_A_31 | 1g0o | A | 31 | 50 | VALVTGAGRGIGREMAMELG | EEEETTTTSHHHHHHHHHHH | bbbbxvaabeaaaaaaaaaa |
1gee_A_9 | 1gee | A | 9 | 28 | VVVITGSSTGLGKSMAIRFA | EEEETT-SSHHHHHHHHHHH | xbbbxlaabeaaaaaaaaaa |
1gz6_A_11 | 1gz6 | A | 11 | 30 | VVLVTGAGGGLGRAYALAFA | EEEETTTTSHHHHHHHHHHH | bbbbxvaabeaaaaaaaaaa |
1hxh_A_8 | 1hxh | A | 8 | 27 | VALVTGGASGVGLEVVKLLL | EEEETTTTSHHHHHHHHHHH | bbbbxlaabeaaaaaaaaaa |
1ja9_A_31 | 1ja9 | A | 31 | 50 | VALTTGAGRGIGRGIAIELG | EEEETTTTSHHHHHHHHHHH | bbbbxvaabeaaaaaaaaaa |
1jtv_A_3 | 1jtv | A | 4 | 23 | VVLITGCSSGIGLHLAVRLA | EEEES--SSHHHHHHHHHHH | xbbbxvaabeaaaaaaaaaa |
1mxh_A_13 | 1mxh | A | 13 | 32 | AAVITGGARRIGHSIAVRLH | EEEETT-SSHHHHHHHHHHH | bbbbxlaabeaaaaaaaaaa |
1n5d_A_6 | 1n5d | A | 6 | 25 | VALVTGANKGIGFAIVRDLC | EEEESS-SSHHHHHHHHHHH | bbbbxlaabeaaaaaaaaaa |
1nxq_A_8 | 1nxq | A | 8 | 27 | VAIITGGTLGIGLAIATKFV | EEEETT-SSHHHHHHHHHHH | bbbbxlaabeaaaaaaaaaa |
1oaa_*_9 | 1oaa | - | 10 | 29 | VCVLTGASRGFGRALAPQLA | EEEESS-SSHHHHHHHHHHH | bbbbxlaabeaaaaaaaaaa |
1spx_A_8 | 1spx | A | 8 | 27 | VAIITGSSNGIGRATAVLFA | EEEETTTTSHHHHHHHHHHH | bbbbxlaabeaaaaaaaaaa |
2ae1_*_11 | 2ae1 | - | 11 | 30 | TALVTGGSRGIGYGIVEELA | EEEEET-SSHHHHHHHHHHH | xbbbxvaabeaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gz6_A_11 | 1gz6 | A | AC6NAI BINDING SITE FOR CHAIN A | G - 16 |
1gz6_A_11 | 1gz6 | A | AC6NAI BINDING SITE FOR CHAIN A | G - 19 |
1gz6_A_11 | 1gz6 | A | AC6NAI BINDING SITE FOR CHAIN A | G - 20 |
1gz6_A_11 | 1gz6 | A | AC6NAI BINDING SITE FOR CHAIN A | L - 21 |
Clusters included in this Subclass |
CLUSTER: EH.4.37 |