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Information on SUBCLASS 5.2.5
Subclass Accession number: 1373
Subclass: 5.2.5 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.4 (>50 %)  1.4.3 (>50 %)  1.4.3.16
GO : GO:0003723 (>75 %)  GO:0015036 (>50 %)  
SCOP : 56424 (>75 %)  56425 (>75 %)  56426 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 9.0 +/- 11.2
Average RMSD (Å) : 0.750 +/- 0.191

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXhXphpXp
(φψ)-conformation: bbaaappaa
Pattern: x[KLV]xx[PRS][AEQR][ILVY][EPS]x[AER]x[ALT]x
Conservation:-1.0000.235-1.325-0.3860.1230.5931.4160.961-0.2591.043-1.3250.525-1.600
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jj7_A_5671jj7   A567578.KPLPQYEHRYLH.EEGGGB-HHHHH.bxaaaxxaaaaa
1jv1_A_2981jv1   A301313VVEYSEISLATAQEE-GGGS-HHHHHbxxaaaxxaaaaa
1kl9_A_811kl9   A8395DLSKRRVSPEEAIEEESTT--HHHHHbbbaaaxxaaaaa
1lni_A_51lni   A517TVCLSALPPEATDEEEGGGS-HHHHHbbxaaaxpaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jv1_A_2981jv1   A     UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE V - 301
1jv1_A_2981jv1   A     UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE E - 303
1jv1_A_2981jv1   A     UD1URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE Y - 304
1kl9_A_811kl9   A     MSESELENOMETHIONINE I - 82
1kl9_A_811kl9   A     MSESELENOMETHIONINE D - 83
1kl9_A_811kl9   A     MSESELENOMETHIONINE L - 84
1kl9_A_811kl9   A     MSESELENOMETHIONINE S - 85
1kl9_A_811kl9   A     MSESELENOMETHIONINE A - 94
1kl9_A_811kl9   A     MSESELENOMETHIONINE C - 97
1kl9_A_811kl9   A     MSESELENOMETHIONINE E - 98
1kl9_A_811kl9   A     MSESELENOMETHIONINE F - 101
1kl9_A_811kl9   A     ZNZINC ION H - 113
1kl9_A_811kl9   A     ZNZINC ION E - 116
1lni_A_51lni   A     GOLGLYCEROL T - 5
1lni_A_51lni   A     GOLGLYCEROL V - 6
1lni_A_51lni   A     GOLGLYCEROL C - 7

Clusters included in this Subclass
CLUSTER: EH.4.296
CLUSTER: EH.5.286