Logo
Information on SUBCLASS 5.21.3
Subclass Accession number: 3255
Subclass: 5.21.3 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  
SCOP : 53821 (>50 %)  53822 (>50 %)  53823 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 11.1 +/- 13.4
Average RMSD (Å) : 0.833 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhXpXpXXh
(φψ)-conformation: bbabaapaa
Pattern: [KRS][IV][GL]x[LTV][AIV]x[KS]x[DE][ADT][AGN][FIY][CFM][AS]xxx[EKR][AR][FIV][EN][EK][DEN]
Conservation:-0.0611.741-0.672-1.196-0.402-0.061-1.0820.508-1.3092.307-0.855-0.5150.506-0.2880.838-0.969-0.855-1.4230.5060.0020.1651.0231.3620.733
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dbq_A_611dbq   A6184SIGLLATSSEAAYFAEIIEAVEKNEEEEEES-TTSHHHHHHHHHHHHHbbbbbbabaaxaaaaaaaaaaaaa
1gca_*_31gca   -427RIGVTIYKYDDNFMSVVRKAIEKDEEEEEES-TT-HHHHHHHHHHHHHxbxbbbabaaxaaaaaaaaaaaaa
1psq_A_441psq   A4568KVLSVVPSIDTGICSTQTRRFNEEEEEEE-S-TTSHHHHHHHHHHHHHbbxbbbabaabaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbq_A_611dbq   A     MGMAGNESIUM ION S - 69
1dbq_A_611dbq   A     MGMAGNESIUM ION E - 70
1dbq_A_611dbq   A     MGMAGNESIUM ION I - 78
1dbq_A_611dbq   A     MGMAGNESIUM ION E - 79
1dbq_A_611dbq   A     MGMAGNESIUM ION E - 82
1gca_*_31gca   *     GALD-GALACTOSE Y - 10
1gca_*_31gca   *     CACALCIUM ION Y - 10
1gca_*_31gca   *     GALD-GALACTOSE D - 14
1gca_*_31gca   *     CACALCIUM ION D - 14
1gca_*_31gca   *     GALD-GALACTOSE N - 15
1gca_*_31gca   *     CACALCIUM ION N - 15
1gca_*_31gca   *     GALD-GALACTOSE F - 16
1gca_*_31gca   *     CACALCIUM ION F - 16
1gca_*_31gca   *     GALD-GALACTOSE M - 17
1gca_*_31gca   *     CACALCIUM ION M - 17
1gca_*_31gca   *     GALD-GALACTOSE S - 18
1gca_*_31gca   *     CACALCIUM ION S - 18
1psq_A_441psq   A     MSESELENOMETHIONINE V - 50
1psq_A_441psq   A     MSESELENOMETHIONINE P - 51
1psq_A_441psq   A     MSESELENOMETHIONINE S - 52
1psq_A_441psq   A     MSESELENOMETHIONINE I - 53
1psq_A_441psq   A     MSESELENOMETHIONINE T - 62
1psq_A_441psq   A     MSESELENOMETHIONINE N - 66

Clusters included in this Subclass
CLUSTER: EH.5.174