Information on SUBCLASS 5.21.3 |
Subclass Accession number: 3255
Subclass: 5.21.3 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>50 %) SCOP : 53821 (>50 %) 53822 (>50 %) 53823 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 13.4 Average RMSD (Å) : 0.833 +/- 0.115 Consensus geometry
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Consensus Sequence: | XhXpXpXXh |
(φψ)-conformation: | bbabaapaa |
Pattern: | [KRS] | [IV] | [GL] | x | [LTV] | [AIV] | x | [KS] | x | [DE] | [ADT] | [AGN] | [FIY] | [CFM] | [AS] | x | x | x | [EKR] | [AR] | [FIV] | [EN] | [EK] | [DEN] |
Conservation: | -0.061 | 1.741 | -0.672 | -1.196 | -0.402 | -0.061 | -1.082 | 0.508 | -1.309 | 2.307 | -0.855 | -0.515 | 0.506 | -0.288 | 0.838 | -0.969 | -0.855 | -1.423 | 0.506 | 0.002 | 0.165 | 1.023 | 1.362 | 0.733 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dbq_A_61 | 1dbq | A | 61 | 84 | SIGLLATSSEAAYFAEIIEAVEKN | EEEEEES-TTSHHHHHHHHHHHHH | bbbbbbabaaxaaaaaaaaaaaaa |
1gca_*_3 | 1gca | - | 4 | 27 | RIGVTIYKYDDNFMSVVRKAIEKD | EEEEEES-TT-HHHHHHHHHHHHH | xbxbbbabaaxaaaaaaaaaaaaa |
1psq_A_44 | 1psq | A | 45 | 68 | KVLSVVPSIDTGICSTQTRRFNEE | EEEEE-S-TTSHHHHHHHHHHHHH | bbxbbbabaabaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | S - 69 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | E - 70 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | I - 78 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | E - 79 |
1dbq_A_61 | 1dbq | A | MGMAGNESIUM ION | E - 82 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | Y - 10 |
1gca_*_3 | 1gca | * | CACALCIUM ION | Y - 10 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | D - 14 |
1gca_*_3 | 1gca | * | CACALCIUM ION | D - 14 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | N - 15 |
1gca_*_3 | 1gca | * | CACALCIUM ION | N - 15 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | F - 16 |
1gca_*_3 | 1gca | * | CACALCIUM ION | F - 16 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | M - 17 |
1gca_*_3 | 1gca | * | CACALCIUM ION | M - 17 |
1gca_*_3 | 1gca | * | GALD-GALACTOSE | S - 18 |
1gca_*_3 | 1gca | * | CACALCIUM ION | S - 18 |
1psq_A_44 | 1psq | A | MSESELENOMETHIONINE | V - 50 |
1psq_A_44 | 1psq | A | MSESELENOMETHIONINE | P - 51 |
1psq_A_44 | 1psq | A | MSESELENOMETHIONINE | S - 52 |
1psq_A_44 | 1psq | A | MSESELENOMETHIONINE | I - 53 |
1psq_A_44 | 1psq | A | MSESELENOMETHIONINE | T - 62 |
1psq_A_44 | 1psq | A | MSESELENOMETHIONINE | N - 66 |
Clusters included in this Subclass |
CLUSTER: EH.5.174 |