Information on SUBCLASS 5.22.1 |
Subclass Accession number: 7483
Subclass: 5.22.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 9.3 +/- 12.9 Average RMSD (Å) : 1.357 +/- 0.299 Consensus geometry
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Consensus Sequence: | XhXXXhXXp |
(φψ)-conformation: | bbpbppbaa |
Pattern: | [fltv] | [afivy] | x | x | x | [AILVY] | [cdehnt] | x | [DENQR] | x | [ILVW] | x | [egks] | [fhil] | [giklv] | [ekr] | x | [aefl] |
Conservation: | 0.432 | -0.016 | -0.852 | -1.104 | -0.289 | 1.405 | -0.650 | -0.682 | 2.081 | -0.890 | 1.652 | -0.868 | 0.772 | -0.024 | -0.938 | 1.095 | -0.641 | -0.483 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c30_A_615 | 1c30 | A | 616 | 633 | LYFEPVTLEDVLEIVRIE | EE----SHHHHHHHHHHH | bbxbxxbaaaaaaaaaaa |
1c30_A_63 | 1c30 | A | 64 | 81 | TYIEPIHWEVVRKIIEKE | EE-S---HHHHHHHHHHH | bbxbpxbaaaaaaaaaaa |
1gte_A_636 | 1gte | A | 640 | 657 | SIMCSYNKNDWMELSRKA | EE---S-HHHHHHHHHHH | xbbbxxbaaaaaaaaaaa |
1lwj_A_212 | 1lwj | A | 214 | 231 | LAEIWAEARMVDEHGRIF | EE---S-HHHHHHHHHHH | bbbbxbxaaaaaaaaaaa |
1ols_B_69 | 1ols | B | 69 | 86 | VFNTPLCEQGIVGFGIGI | EEE--S-HHHHHHHHHHH | bbxbxxbaaaaaaaaaaa |
1uet_A_277 | 1uet | A | 283 | 300 | FRKPDIVDDNLYPQLERA | EE--SS-HHHHHHHHHHH | bxxxxbxaaaaaaaaaaa |
1v39_*_109 | 1v39 | - | 111 | 128 | LVTRFVDEEYLRSIKKQL | EEE----HHHHHHHHHHH | xbbbxxbaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gte_A_636 | 1gte | A | FMNFLAVIN MONONUCLEOTIDE | S - 640 |
1gte_A_636 | 1gte | A | IUR5-IODOURACIL | M - 642 |
1lwj_A_212 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | E - 216 |
1lwj_A_212 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | I - 217 |
1lwj_A_212 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | W - 218 |
1lwj_A_212 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | A - 219 |
1lwj_A_212 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | E - 220 |
1lwj_A_212 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | A - 221 |
1uet_A_277 | 1uet | A | CACALCIUM ION | Y - 294 |
1uet_A_277 | 1uet | A | ACTACETATE ION | E - 298 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | R - 114 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 115 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | V - 116 |
1v39_*_109 | 1v39 | * | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 117 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ols_B_69 | 1ols | B | TDPTDP BINDING SITE FOR CHAIN A | L - 74 |
1ols_B_69 | 1ols | B | TDPTDP BINDING SITE FOR CHAIN A | E - 76 |
Clusters included in this Subclass |
CLUSTER: EH.4.129 |
CLUSTER: EH.5.55 |