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Information on SUBCLASS 5.28.1
Subclass Accession number: 1422
Subclass: 5.28.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2.1 (>75 %)  1.2.1.32.4 (>75 %)  2.4.1 (>75 %)  2.4.1.19
GO : GO:0004028 (>75 %)  GO:0004553 (>75 %)  GO:0005509 (>75 %)  GO:0005529 (>75 %)  GO:0016160 (>75 %)  GO:0016620 (>75 %)  GO:0016798 (>75 %)  GO:0016903 (>75 %)  GO:0030246 (>75 %)  
SCOP : 51445 (>75 %)  51446 (>75 %)  53696 (>75 %)  53697 (>75 %)  53719 (>75 %)  53720 (>75 %)  53721 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 24.8 +/- 20.2
Average RMSD (Å) : 0.380 +/- 0.045

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hSXpGpTpp
(φψ)-conformation: bbaalapaa
Pattern: x[AFIL]x[GILV][AFI][AS][AGKR][ST][FG][ENRT][T][PQT][ESY][PTV][AILV][ailt][agn]x[DEKQR][itvy][AFL][KR][DEKS]
Conservation:-0.376-0.364-0.756-0.992-0.1901.148-0.4081.0030.940-0.2922.8230.052-0.054-0.2060.215-1.064-1.021-1.2230.051-1.000-0.3951.9370.172
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c7q_A_1321c7q   A133155SINVISKSGTTTEPAIAFRIFRDEEEEE-SSS--HHHHHHHHHHHHbbbxbbaavapaaaaaaaaaaaa
1iat_A_2031iat   A204226LFIIASKTFTTQETITNAETAKEEEEEE-SSS--HHHHHHHHHHHHbbbxbbaavapaaaaaaaaaaaa
1j5x_A_901j5x   A91113LAFLFSRTGNTTEVLLANDVLKKEEEEE-SSS--HHHHHHHHHHHHbbxbbbaavapaaaaaaaaaaaa
1nri_A_1401nri   A140162VLVGIAASGRTPYVIAGLQYAKSEEEEE-TTS--HHHHHHHHHHHHbbbxbbaavaxaaaaaaaaaaaa
1vim_A_791vim   A79101VLVGISGSGETTSVVNISKKAKDEEEEE-SSS--HHHHHHHHHHHHbbbbbbaavapaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iat_A_2031iat   A     SULSULFATE ANION A - 208
1iat_A_2031iat   A     SULSULFATE ANION S - 209
1iat_A_2031iat   A     SULSULFATE ANION K - 210
1iat_A_2031iat   A     SULSULFATE ANION T - 211
1iat_A_2031iat   A     SULSULFATE ANION F - 212
1iat_A_2031iat   A     SULSULFATE ANION T - 213
1iat_A_2031iat   A     SULSULFATE ANION T - 214
1iat_A_2031iat   A     SULSULFATE ANION T - 217
1j5x_A_901j5x   A     MSESELENOMETHIONINE R - 97
1nri_A_1401nri   A     MSESELENOMETHIONINE G - 143
1nri_A_1401nri   A     MSESELENOMETHIONINE I - 144
1nri_A_1401nri   A     MSESELENOMETHIONINE A - 145
1nri_A_1401nri   A     MSESELENOMETHIONINE S - 147
1nri_A_1401nri   A     MSESELENOMETHIONINE G - 148
1nri_A_1401nri   A     MSESELENOMETHIONINE R - 149
1nri_A_1401nri   A     MSESELENOMETHIONINE T - 150
1nri_A_1401nri   A     MSESELENOMETHIONINE V - 153
1nri_A_1401nri   A     MSESELENOMETHIONINE I - 154
1nri_A_1401nri   A     MSESELENOMETHIONINE L - 157
1vim_A_791vim   A     FMTFORMIC ACID I - 102

Clusters included in this Subclass
CLUSTER: EH.5.65