Information on SUBCLASS 5.50.1 |
Subclass Accession number: 3287
Subclass: 5.50.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 11.9 +/- 12.9 Average RMSD (Å) : 1.150 +/- 0.370 Consensus geometry
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Consensus Sequence: | XXXXXXpXp |
(φψ)-conformation: | bbgbpppaa |
Pattern: | x | [LTV] | x | [AGTV] | [AEG] | [EG] | x | [AGKS] | x | [DST] | x | [DES] | x | [ALV] |
Conservation: | -0.958 | 0.589 | -0.706 | -0.706 | 0.010 | 2.251 | -1.042 | -0.202 | -0.469 | 0.924 | 0.026 | 1.140 | -1.378 | 0.521 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1amu_A_297 | 1amu | A | 297 | 310 | TLITAGSATSPSLV | EEEEESS---HHHH | bbbbbgbxxbaaaa |
1kyg_A_130 | 1kyg | A | 134 | 147 | EVTAEGIGRDASDL | EEE-TTS---HHHH | bbbxpgxxxxaaaa |
1mdb_A_302 | 1mdb | A | 302 | 315 | VLQVGGAKFSAEAA | EEEEESS---HHHH | bbxbbgbxxpaaaa |
1uds_A_197 | 1uds | A | 201 | 214 | HTMGEEYSFTKDEL | EEEESS----HHHH | bbbxbvbbbbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1amu_A_297 | 1amu | A | AMPADENOSINE MONOPHOSPHATE | T - 300 |
1amu_A_297 | 1amu | A | AMPADENOSINE MONOPHOSPHATE | A - 301 |
1amu_A_297 | 1amu | A | AMPADENOSINE MONOPHOSPHATE | G - 302 |
1amu_A_297 | 1amu | A | AMPADENOSINE MONOPHOSPHATE | S - 303 |
1amu_A_297 | 1amu | A | AMPADENOSINE MONOPHOSPHATE | A - 304 |
1amu_A_297 | 1amu | A | AMPADENOSINE MONOPHOSPHATE | T - 305 |
1mdb_A_302 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | V - 305 |
1mdb_A_302 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | G - 306 |
1mdb_A_302 | 1mdb | A | DBH2,3-DIHYDROXY-BENZOIC ACID | G - 306 |
1mdb_A_302 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | G - 307 |
1mdb_A_302 | 1mdb | A | DBH2,3-DIHYDROXY-BENZOIC ACID | G - 307 |
1mdb_A_302 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | A - 308 |
1mdb_A_302 | 1mdb | A | DBH2,3-DIHYDROXY-BENZOIC ACID | A - 308 |
1mdb_A_302 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | K - 309 |
1mdb_A_302 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | F - 310 |
Clusters included in this Subclass |
CLUSTER: EH.5.331 |
CLUSTER: EH.6.233 |