Logo
Information on SUBCLASS 5.50.1
Subclass Accession number: 3287
Subclass: 5.50.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 11.9 +/- 12.9
Average RMSD (Å) : 1.150 +/- 0.370

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXXXXpXp
(φψ)-conformation: bbgbpppaa
Pattern: x[LTV]x[AGTV][AEG][EG]x[AGKS]x[DST]x[DES]x[ALV]
Conservation:-0.9580.589-0.706-0.7060.0102.251-1.042-0.202-0.4690.9240.0261.140-1.3780.521
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amu_A_2971amu   A297310TLITAGSATSPSLVEEEEESS---HHHHbbbbbgbxxbaaaa
1kyg_A_1301kyg   A134147EVTAEGIGRDASDLEEE-TTS---HHHHbbbxpgxxxxaaaa
1mdb_A_3021mdb   A302315VLQVGGAKFSAEAAEEEEESS---HHHHbbxbbgbxxpaaaa
1uds_A_1971uds   A201214HTMGEEYSFTKDELEEEESS----HHHHbbbxbvbbbbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1amu_A_2971amu   A     AMPADENOSINE MONOPHOSPHATE T - 300
1amu_A_2971amu   A     AMPADENOSINE MONOPHOSPHATE A - 301
1amu_A_2971amu   A     AMPADENOSINE MONOPHOSPHATE G - 302
1amu_A_2971amu   A     AMPADENOSINE MONOPHOSPHATE S - 303
1amu_A_2971amu   A     AMPADENOSINE MONOPHOSPHATE A - 304
1amu_A_2971amu   A     AMPADENOSINE MONOPHOSPHATE T - 305
1mdb_A_3021mdb   A     AMPADENOSINE MONOPHOSPHATE V - 305
1mdb_A_3021mdb   A     AMPADENOSINE MONOPHOSPHATE G - 306
1mdb_A_3021mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID G - 306
1mdb_A_3021mdb   A     AMPADENOSINE MONOPHOSPHATE G - 307
1mdb_A_3021mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID G - 307
1mdb_A_3021mdb   A     AMPADENOSINE MONOPHOSPHATE A - 308
1mdb_A_3021mdb   A     DBH2,3-DIHYDROXY-BENZOIC ACID A - 308
1mdb_A_3021mdb   A     AMPADENOSINE MONOPHOSPHATE K - 309
1mdb_A_3021mdb   A     AMPADENOSINE MONOPHOSPHATE F - 310

Clusters included in this Subclass
CLUSTER: EH.5.331
CLUSTER: EH.6.233