Logo
Information on SUBCLASS 5.61.1
Subclass Accession number: 1456
Subclass: 5.61.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.2 (>75 %)  3.2.2.22
GO : GO:0016798 (>75 %)  GO:0016799 (>75 %)  GO:0030597 (>75 %)  
SCOP : 56370 (>75 %)  56371 (>75 %)  56372 (>75 %)  
Number of loops: 2

Average sequence ID (%) : 4.3 +/- 0.0
Average RMSD (Å) : 0.700 +/- 0.000

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XhhhXpcpX
(φψ)-conformation: bbpppapaa
Pattern: [SW][VY]x[CL][GY][PV][AN][ES][DN][KR][CK]x[ET]xx[CL][KV][CK][DN]x[E][IK][AL]
Conservation:0.2060.206-0.6970.658-0.245-0.245-0.4710.2061.3351.335-0.020-1.148-0.020-1.374-1.3740.658-0.697-0.0201.335-0.6972.689-1.148-0.471
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kbi_A_2491kbi   A250272WYQLYVNSDRKITDDLVKNVEKLEEEE---SSHHHHHHHHHHHHHHbbxbbxxaxaaaaaaaaaaaaaa
1le6_A_731le6   A7395SVLCGPAENKCQELLCKCDQEIAEEEE---SSHHHHHHHHHHHHHHbxbxxpxabaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kbi_A_2491kbi   A     FMNFLAVIN MONONUCLEOTIDE Q - 252
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL L - 253
1kbi_A_2491kbi   A     FMNFLAVIN MONONUCLEOTIDE Y - 254
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL V - 255
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL R - 259
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL T - 262
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL D - 263
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL V - 266

Clusters included in this Subclass
CLUSTER: EH.6.240