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Information on SUBCLASS 5.9.1
Subclass Accession number: 3232
Subclass: 5.9.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 29

Average sequence ID (%) : 15.5 +/- 16.0
Average RMSD (Å) : 0.838 +/- 0.313

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXXXGXpXX
(φψ)-conformation: bbppgbpaa
Pattern: [afgilmtv]xxx[deknpqst][agn][acflmptv][dhnpst]x[dehknpqrs][adekqst][acilmtv]x
Conservation:-0.078-0.611-0.733-0.534-0.1933.070-0.2990.427-0.626-0.3890.0110.488-0.533
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayf_A_181ayf   A2133TKGKIGDSLLDVVEEE-TT-BHHHHHbbbxpgxxaaaaa
1bwv_A_361bwv   A4254VTPQPGVDPIEAAEEE-TT--HHHHHbbwxpgxxaaaaa
1c1y_B_661c1y   B7082VNVRNGMSLHDCLEE--TT-BHHHHHbxbbpgxxaGaaa
1e1o_A_2731e1o   A278290ELYMAYADYHDLIEEEEES--HHHHHbbbbxvbbaaaaa
1efu_B_1511efu   B154166LVAAKGADEELVKEEEEES--HHHHHbbbbbvbxaaaaa
1f0x_A_4941f0x   A499511YIVKKGVDVHALKEEEETT--HHHHHbbxppvxxaaaaa
1frr_A_111frr   A1527LDVPEGTTILDAAEEE-TT--HHHHHbbbxpvbxaaaaa
1g0s_A_951g0s   A97109GMIEEGESVEDVAEE--TT--HHHHHbxxbpvbxaaaaa
1gk8_A_371gk8   A4254MTPQPGVPPEECGEEE-TT--HHHHHbbxxpvbwaaaaa
1hrh_A_4641hrh   A466478VVPLTNTTNQKTEEEEEES--HHHHHbbwbbvbbaaaaa
1k8w_A_131k8w   A1729LDKPQGMSSNDALEEE-TT--HHHHHxxxxxvxxaaaaa
1k8w_A_1671k8w   A172184IHCSKGTYIRTIIEEE-TT--HHHHHbbbxpvxxaaaaa
1krh_A_151krh   A1830ICIAQGETLSDAAEEE-TT--HHHHHbbbxxgxxaaaaa
1l0l_B_2041l0l   B205217ALIGLGVSHPVLKEEEEESS-HHHHHbbbbbvbxaaaaa
1lfw_A_3431lfw   A349361VRYPQGTDPDTMIEEE-TT--HHHHHbbbwxgbbaaaaa
1ng2_A_2801ng2   A280291.LQKSGQDVSQAQ.EEETTS-HHHHH.bbppvbxaaaaa
1nx4_A_2021nx4   A203215EPRIVGFTDHETQEEEETT--HHHHHbwbbxvbxaaaaa
1oih_A_2161oih   A216228VKRIKGYSLADSQEEEETTS-HHHHHxabxxvbpaaaaa
1ooy_A_4441ooy   A448460IELWEGLTVDDIKEEE-TT--HHHHHabbxpvbbaaaaa
1pne_*_1081pne   -112124LMGKEGVHGGMINEEE-TT--HHHHHbbxxxvxpaaaaa
1q4r_A_111q4r   A1729ASFKDGVSPEKIEEEE-TT--HHHHHbbxxpvxxaaaaa
1r3e_A_131r3e   A1729AYKPKGPTSHDVVEEE-SSS-HHHHHxbbxxGxxaaaaa
1r3e_A_1671r3e   A172184VEVSPGTYIRSLCEEE-TT--HHHHHbbbxpvxbaaaaa
1rbl_A_361rbl   A4254FSPQPGVPADEAGEEE-TT--HHHHHbbxxpvxxaaaaa
1sgv_A_71sgv   A1123IDKPAGMTSHDVVEEE-TT--HHHHHbxxwxgxxaaaaa
1szw_A_431szw   A4759RILKNGCNTRFVAEEEESSS-HHHHHxbxbbgbxaaaaa
1tca_*_331tca   -3648LVPGTGTTGPQSFEE--TT--HHHHHbbxxpvbxaaaaa
1v8c_A_871v8c   A90102ERTFGAFPPWLLEEEEEET--HHHHHbbbbxlbxaaaaa
1xxa_A_1301xxa   A133145TTPANGFTVKDLYEEE-TT--HHHHHbbxxpgxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayf_A_181ayf   A     FESFE2/S2 (INORGANIC) CLUSTER L - 30
1e1o_A_2731e1o   A     GOLGLYCEROL F - 274
1e1o_A_2731e1o   A     GOLGLYCEROL T - 275
1e1o_A_2731e1o   A     LYSLYSINE M - 276
1e1o_A_2731e1o   A     GOLGLYCEROL M - 276
1e1o_A_2731e1o   A     LYSLYSINE E - 278
1e1o_A_2731e1o   A     LYSLYSINE L - 279
1e1o_A_2731e1o   A     LYSLYSINE Y - 280
1e1o_A_2731e1o   A     GOLGLYCEROL Y - 286
1e1o_A_2731e1o   A     GOLGLYCEROL H - 287
1f0x_A_4941f0x   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 496
1frr_A_111frr   A     FESFE2/S2 (INORGANIC) CLUSTER L - 24
1gk8_A_371gk8   A     EGLETHYLENE GLYCOL G - 47
1gk8_A_371gk8   A     EGLETHYLENE GLYCOL V - 48
1gk8_A_371gk8   A     EGLETHYLENE GLYCOL P - 49
1gk8_A_371gk8   A     EGLETHYLENE GLYCOL E - 52
1gk8_A_371gk8   A     EGLETHYLENE GLYCOL A - 56
1gk8_A_371gk8   A     EGLETHYLENE GLYCOL A - 59
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE S - 175
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE K - 176
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE G - 177
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE T - 178
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE Y - 179
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE I - 180
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE R - 181
1k8w_A_1671k8w   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE T - 182
1lfw_A_3431lfw   A     AEP3-[(1-AMINO-2-CARBOXY-ETHYL)-HYDROXY-PHOSPHINOYL]-2-METHYL-PROPIONIC ACID N - 348
1lfw_A_3431lfw   A     AEP3-[(1-AMINO-2-CARBOXY-ETHYL)-HYDROXY-PHOSPHINOYL]-2-METHYL-PROPIONIC ACID R - 350
1nx4_A_2021nx4   A     MSESELENOMETHIONINE L - 221
1nx4_A_2021nx4   A     MSESELENOMETHIONINE F - 224
1nx4_A_2021nx4   A     MSESELENOMETHIONINE L - 225
1q4r_A_111q4r   A     MSESELENOMETHIONINE H - 13
1q4r_A_111q4r   A     MSESELENOMETHIONINE Y - 35
1q4r_A_111q4r   A     MSESELENOMETHIONINE A - 36
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE P - 176
1r3e_A_1671r3e   A     FHU(5S,6R)-5-FLUORO-6-HYDROXY-PSEUDOURIDINE-5'-MONOPHOSPHATE S - 182
1szw_A_431szw   A     MSESELENOMETHIONINE I - 44

Clusters included in this Subclass
CLUSTER: EH.4.162
CLUSTER: EH.4.388
CLUSTER: EH.4.54
CLUSTER: EH.5.159
CLUSTER: EH.5.162
CLUSTER: EH.5.223
CLUSTER: EH.5.227
CLUSTER: EH.5.383
CLUSTER: EH.6.148
CLUSTER: EH.6.29