Information on SUBCLASS 6.17.1 |
Subclass Accession number: 7542
Subclass: 6.17.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 27.8 +/- 27.2 Average RMSD (Å) : 0.750 +/- 0.436 Consensus geometry
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Consensus Sequence: | hhXXhhXGXh |
(φψ)-conformation: | bwaalppgaa |
Pattern: | [CFVY] | [IVY] | [AF] | [CP] | [AS] | [AD] | [AGM] | [GIM] | x | [G] | [FQR] | [AIV] | x | [ADP] | [AI] | [AKR] | x | [AG] | [LV] | x | x |
Conservation: | -0.370 | 0.260 | -0.052 | 0.871 | 0.799 | -0.138 | -0.657 | -0.779 | -0.244 | 3.353 | -0.607 | 0.195 | -1.324 | -0.543 | 0.115 | 0.094 | -0.895 | 0.815 | 0.799 | -0.751 | -0.942 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bfd_*_395 | 1bfd | - | 395 | 415 | YYFCAAGGLGFALPAAIGVQL | EEE-TT--SS-HHHHHHHHHH | bbbpaavxxgaaaaaaaaaaa |
1gzg_A_171 | 1gzg | A | 171 | 191 | VVAPSDMMDGRIGAIREALES | EEEE-S--TTHHHHHHHHHHH | bbbwaalxxvaaaaaaaaaaa |
1h7n_A_175 | 1h7n | A | 175 | 195 | CVAPSDMIDGRIRDIKRGLIN | EEEE----TTHHHHHHHHHHH | bbbwaavxpvaaaaaaaaaaa |
1l6s_A_160 | 1l6s | A | 160 | 180 | FIAPSAAMDGQVQAIRQALDA | EEEE-S--TTHHHHHHHHHHH | bbbwaalbxvaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bfd_*_395 | 1bfd | * | TPPTHIAMINE DIPHOSPHATE | G - 401 |
1bfd_*_395 | 1bfd | * | TPPTHIAMINE DIPHOSPHATE | G - 402 |
1bfd_*_395 | 1bfd | * | TPPTHIAMINE DIPHOSPHATE | L - 403 |
1bfd_*_395 | 1bfd | * | TPPTHIAMINE DIPHOSPHATE | G - 404 |
1gzg_A_171 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | S - 175 |
1gzg_A_171 | 1gzg | A | LAF5-FLUOROLEVULINIC ACID | D - 176 |
1gzg_A_171 | 1gzg | A | MGMAGNESIUM ION | M - 177 |
1gzg_A_171 | 1gzg | A | MGMAGNESIUM ION | M - 178 |
1gzg_A_171 | 1gzg | A | MGMAGNESIUM ION | D - 179 |
1gzg_A_171 | 1gzg | A | MGMAGNESIUM ION | G - 180 |
1gzg_A_171 | 1gzg | A | MGMAGNESIUM ION | R - 181 |
1h7n_A_175 | 1h7n | A | SHFLAEVULINIC ACID | S - 179 |
1h7n_A_175 | 1h7n | A | ZNZINC ION | S - 179 |
1h7n_A_175 | 1h7n | A | ZNZINC ION | D - 180 |
1l6s_A_160 | 1l6s | A | ZNZINC ION | S - 164 |
1l6s_A_160 | 1l6s | A | DSB4,7-DIOXOSEBACIC ACID | S - 164 |
1l6s_A_160 | 1l6s | A | ZNZINC ION | A - 165 |
1l6s_A_160 | 1l6s | A | MGMAGNESIUM ION | A - 166 |
1l6s_A_160 | 1l6s | A | MGMAGNESIUM ION | M - 167 |
1l6s_A_160 | 1l6s | A | MGMAGNESIUM ION | D - 168 |
1l6s_A_160 | 1l6s | A | MGMAGNESIUM ION | G - 169 |
1l6s_A_160 | 1l6s | A | MGMAGNESIUM ION | Q - 170 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gzg_A_171 | 1gzg | A | LA2LAF BINDING SITE FOR CHAIN A | S - 175 |
1gzg_A_171 | 1gzg | A | MGAMG BINDING SITE FOR CHAIN A | R - 181 |
Clusters included in this Subclass |
CLUSTER: EH.7.68 |