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Information on SUBCLASS 6.26.1
Subclass Accession number: 3365
Subclass: 6.26.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 22.1 +/- 28.1
Average RMSD (Å) : 0.757 +/- 0.207

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hphchXhXXX
(φψ)-conformation: bbagbpbpaa
Pattern: [ipw][AIVY]x[stv][ACFTV][dhnt][LPTV][DGK][CFLV][KPRS][ilv][DPRS][LT][EKP][AGLTV][ILV][AFVY]
Conservation:-1.8560.493-1.228-0.138-0.711-0.335-0.6170.4230.0910.1130.364-0.3251.1991.180-0.8252.405-0.231
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cdw_A_1601cdw   A164180IVSTVNLGCKLDLKTIAEEEEEE-SS---HHHHHbbbbbbavbxbxaaaaa
1kvk_A_2301kvk   A231247QILLTNTKVPRSTKALVEEEEEE------HHHHHxbbxbbavxwbbaaaaa
1nh2_A_661nh2   A7086IVATVTLGCRLDLKTVAEEEEEE-SS---HHHHHbbbbbbavbxbxaaaaa
1oj4_A_1691oj4   A169185WYLVAHPGVSIPTPVIFEEEEE--S----HHHHHxbbbbbagxxxxaaaaa
1qna_A_1111qna   A118134IVGSCDVKFPIRLEGLAEEEEEE-SS-B-HHHHHbbbbbbavbxbxaaaaa
1qna_A_241qna   A2844IVSTVNLDCKLDLKAIAEEEEEE--S---HHHHHbbbbbbalbxbxaaaaa
1uek_A_1521uek   A153169PAVVFFPGLRVPTPLVYEEEEEE------HHHHHwbbbbbavbxbpaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oj4_A_1691oj4   A     MSESELENOMETHIONINE H - 174
1oj4_A_1691oj4   A     MSESELENOMETHIONINE S - 178
1oj4_A_1691oj4   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER S - 178
1oj4_A_1691oj4   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER I - 179
1oj4_A_1691oj4   A     CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL T - 181
1oj4_A_1691oj4   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER T - 181
1oj4_A_1691oj4   A     CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL P - 182
1oj4_A_1691oj4   A     CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL F - 185
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oj4_A_1691oj4   A AC2CDM BINDING SITE FOR CHAIN AT - 181

Clusters included in this Subclass
CLUSTER: EH.6.71