Information on SUBCLASS 6.26.1 |
Subclass Accession number: 3365
Subclass: 6.26.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 22.1 +/- 28.1 Average RMSD (Å) : 0.757 +/- 0.207 Consensus geometry
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Consensus Sequence: | hphchXhXXX |
(φψ)-conformation: | bbagbpbpaa |
Pattern: | [ipw] | [AIVY] | x | [stv] | [ACFTV] | [dhnt] | [LPTV] | [DGK] | [CFLV] | [KPRS] | [ilv] | [DPRS] | [LT] | [EKP] | [AGLTV] | [ILV] | [AFVY] |
Conservation: | -1.856 | 0.493 | -1.228 | -0.138 | -0.711 | -0.335 | -0.617 | 0.423 | 0.091 | 0.113 | 0.364 | -0.325 | 1.199 | 1.180 | -0.825 | 2.405 | -0.231 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cdw_A_160 | 1cdw | A | 164 | 180 | IVSTVNLGCKLDLKTIA | EEEEEE-SS---HHHHH | bbbbbbavbxbxaaaaa |
1kvk_A_230 | 1kvk | A | 231 | 247 | QILLTNTKVPRSTKALV | EEEEEE------HHHHH | xbbxbbavxwbbaaaaa |
1nh2_A_66 | 1nh2 | A | 70 | 86 | IVATVTLGCRLDLKTVA | EEEEEE-SS---HHHHH | bbbbbbavbxbxaaaaa |
1oj4_A_169 | 1oj4 | A | 169 | 185 | WYLVAHPGVSIPTPVIF | EEEEE--S----HHHHH | xbbbbbagxxxxaaaaa |
1qna_A_111 | 1qna | A | 118 | 134 | IVGSCDVKFPIRLEGLA | EEEEEE-SS-B-HHHHH | bbbbbbavbxbxaaaaa |
1qna_A_24 | 1qna | A | 28 | 44 | IVSTVNLDCKLDLKAIA | EEEEEE--S---HHHHH | bbbbbbalbxbxaaaaa |
1uek_A_152 | 1uek | A | 153 | 169 | PAVVFFPGLRVPTPLVY | EEEEEE------HHHHH | wbbbbbavbxbpaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oj4_A_169 | 1oj4 | A | MSESELENOMETHIONINE | H - 174 |
1oj4_A_169 | 1oj4 | A | MSESELENOMETHIONINE | S - 178 |
1oj4_A_169 | 1oj4 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | S - 178 |
1oj4_A_169 | 1oj4 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | I - 179 |
1oj4_A_169 | 1oj4 | A | CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL | T - 181 |
1oj4_A_169 | 1oj4 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | T - 181 |
1oj4_A_169 | 1oj4 | A | CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL | P - 182 |
1oj4_A_169 | 1oj4 | A | CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL | F - 185 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oj4_A_169 | 1oj4 | A | AC2CDM BINDING SITE FOR CHAIN A | T - 181 |
Clusters included in this Subclass |
CLUSTER: EH.6.71 |