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Information on SUBCLASS 6.52.1
Subclass Accession number: 3392
Subclass: 6.52.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004553 (>75 %)  GO:0005529 (>50 %)  GO:0016798 (>75 %)  GO:0030246 (>50 %)  
SCOP : 51445 (>75 %)  51487 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 73.3 +/- -28.3
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: FNScSPhXSc
(φψ)-conformation: bbaabwpbaa
Pattern: xxxxxxxxxxxxxxxxxxxx
Conservation:2.1841.0071.007-0.169-0.757-0.1691.596-1.199-1.199-0.169-0.4631.007-0.757-1.199-0.904-0.1690.419-0.9041.007-0.169
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1nq6_A_2061nq6   A206225HFNSNSPVPSDFQANLQRFAEEBTTB---TTHHHHHHHHHxxbaabxxxaaaaaaaaaaa
1od8_A_2071od8   A207226HFNSGSPYNSNFRTTLQNFAEE-SSS---TTHHHHHHHHHxxbaabwpbaaaaaaaaaaa
1v6w_A_2071v6w   A207226HFNSGSPYNSNFRTTLQNFAEEBTTB---TTHHHHHHHHHxbbaabwxbaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1od8_A_2071od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM H - 207
1od8_A_2071od8   A     XYPBETA-D-XYLOPYRANOSE H - 207
1od8_A_2071od8   A     IMDIMIDAZOLE H - 207
1od8_A_2071od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM N - 209
1od8_A_2071od8   A     XYPBETA-D-XYLOPYRANOSE N - 209
1od8_A_2071od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM G - 211
1od8_A_2071od8   A     XYPBETA-D-XYLOPYRANOSE G - 211
1od8_A_2071od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM S - 212
1od8_A_2071od8   A     XYPBETA-D-XYLOPYRANOSE S - 212
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1od8_A_2071od8   A AC6XYS BINDING SITE FOR CHAIN AN - 209
1od8_A_2071od8   A AC5XDL BINDING SITE FOR CHAIN AG - 211
1od8_A_2071od8   A AC5XDL BINDING SITE FOR CHAIN AS - 212

Clusters included in this Subclass
CLUSTER: EH.8.105