Information on SUBCLASS 6.52.1 |
Subclass Accession number: 3392
Subclass: 6.52.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004553 (>75 %) GO:0005529 (>50 %) GO:0016798 (>75 %) GO:0030246 (>50 %) SCOP : 51445 (>75 %) 51487 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 73.3 +/- -28.3 Average RMSD (Å) : 0.400 +/- 0.173 Consensus geometry
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Consensus Sequence: | FNScSPhXSc |
(φψ)-conformation: | bbaabwpbaa |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | 2.184 | 1.007 | 1.007 | -0.169 | -0.757 | -0.169 | 1.596 | -1.199 | -1.199 | -0.169 | -0.463 | 1.007 | -0.757 | -1.199 | -0.904 | -0.169 | 0.419 | -0.904 | 1.007 | -0.169 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1nq6_A_206 | 1nq6 | A | 206 | 225 | HFNSNSPVPSDFQANLQRFA | EEBTTB---TTHHHHHHHHH | xxbaabxxxaaaaaaaaaaa |
1od8_A_207 | 1od8 | A | 207 | 226 | HFNSGSPYNSNFRTTLQNFA | EE-SSS---TTHHHHHHHHH | xxbaabwpbaaaaaaaaaaa |
1v6w_A_207 | 1v6w | A | 207 | 226 | HFNSGSPYNSNFRTTLQNFA | EEBTTB---TTHHHHHHHHH | xbbaabwxbaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1od8_A_207 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | H - 207 |
1od8_A_207 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | H - 207 |
1od8_A_207 | 1od8 | A | IMDIMIDAZOLE | H - 207 |
1od8_A_207 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | N - 209 |
1od8_A_207 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | N - 209 |
1od8_A_207 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | G - 211 |
1od8_A_207 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | G - 211 |
1od8_A_207 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | S - 212 |
1od8_A_207 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | S - 212 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1od8_A_207 | 1od8 | A | AC6XYS BINDING SITE FOR CHAIN A | N - 209 |
1od8_A_207 | 1od8 | A | AC5XDL BINDING SITE FOR CHAIN A | G - 211 |
1od8_A_207 | 1od8 | A | AC5XDL BINDING SITE FOR CHAIN A | S - 212 |
Clusters included in this Subclass |
CLUSTER: EH.8.105 |