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Information on SUBCLASS 6.6.1
Subclass Accession number: 1467
Subclass: 6.6.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7.1 (>50 %)  2.7.1.112
GO : GO:0004672 (>50 %)  GO:0004714 (>50 %)  GO:0004872 (>50 %)  GO:0004888 (>50 %)  GO:0005524 (>50 %)  GO:0016301 (>50 %)  GO:0016772 (>50 %)  GO:0016773 (>50 %)  GO:0019199 (>50 %)  GO:0030554 (>50 %)  
SCOP : 51430 (>50 %)  51431 (>50 %)  51604 (>75 %)  51609 (>75 %)  51679 (>75 %)  56111 (>50 %)  56112 (>50 %)  88854 (>50 %)  
 Number of loops: 4

Average sequence ID (%) : 27.8 +/- 21.3
Average RMSD (Å) : 1.250 +/- 0.129

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hXXEShXpXX
(φψ)-conformation: bbaaababaa
Pattern: [IL][FM][ACS]x[E][S][IMV][EFK][DST]x[AER][DNQ][AKQ][FKR][AES][LV][AILM]x
Conservation:0.8450.827-0.047-0.3492.4411.6420.504-0.772-0.098-1.202-0.4820.113-0.576-0.927-0.2590.445-0.504-1.601
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jpm_A_2411jpm   A241258IMADESVFTPRQAFEVLQEEESTT-SSHHHHHHHHHbbxaaababaaaaaaaaa
1luc_B_2941luc   B296313LMSFESMEDKAQQRAVIDEEE-TT---HHHHHHHHHbbbaaaxaxaaaaaaaaa
1muc_A_2461muc   A246263IMADESIESVEDAFSLAAEEESTT-SSHHHHHHHHHxbxaaababaaaaaaaaa
1nfp_*_1921nfp   -195212LFCFESMKDQENKKSLMIEEE-TT---HHHHHHHHHbbbaaaxaxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jpm_A_2411jpm   A     MGMAGNESIUM ION D - 244
1jpm_A_2411jpm   A     MGMAGNESIUM ION E - 245
1luc_B_2941luc   B     EDO1,2-ETHANEDIOL D - 304
1luc_B_2941luc   B     EDO1,2-ETHANEDIOL Q - 307
1muc_A_2461muc   A     MNMANGANESE (II) ION M - 247
1muc_A_2461muc   A     MNMANGANESE (II) ION D - 249
1muc_A_2461muc   A     MNMANGANESE (II) ION E - 250
1nfp_*_1921nfp   *     MYRMYRISTIC ACID F - 194
1nfp_*_1921nfp   *     MYRMYRISTIC ACID F - 196
1nfp_*_1921nfp   *     MYRMYRISTIC ACID F - 198
1nfp_*_1921nfp   *     MYRMYRISTIC ACID L - 210
1nfp_*_1921nfp   *     MYRMYRISTIC ACID M - 211
1nfp_*_1921nfp   *     MYRMYRISTIC ACID F - 214
1nfp_*_1921nfp   *     FMNFLAVIN MONONUCLEOTIDE R - 217
1nfp_*_1921nfp   *     MYRMYRISTIC ACID R - 217
1nfp_*_1921nfp   *     MYRMYRISTIC ACID V - 218
1nfp_*_1921nfp   *     MYRMYRISTIC ACID I - 219
1nfp_*_1921nfp   *     FMNFLAVIN MONONUCLEOTIDE Y - 221
1nfp_*_1921nfp   *     MYRMYRISTIC ACID Y - 221
1nfp_*_1921nfp   *     MYRMYRISTIC ACID R - 222
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1muc_A_2461muc   A MNARESIDUES INVOLVED IN THE COORDINATION OF MN-ION IN CHAIN A.D - 249

Clusters included in this Subclass
CLUSTER: EH.5.125