Information on SUBCLASS 6.6.2 |
Subclass Accession number: 3335
Subclass: 6.6.2 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 20.8 +/- 38.7 Average RMSD (Å) : 0.900 +/- 0.082 Consensus geometry
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Consensus Sequence: | XXXXXXhXXX |
(φψ)-conformation: | bbpaaaapaa |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | 3.048 | 0.224 | -0.953 | -0.247 | 0.694 | -0.600 | -0.365 | -0.600 | 1.283 | -0.012 | -0.953 | -0.012 | -0.365 | -0.012 | -0.836 | -0.600 | -0.483 | -0.012 | -0.836 | 1.636 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e3m_A_196 | 1e3m | A | 196 | 215 | LRRRPLWEFEIDTARQQLNL | EEEE-GGGG-HHHHHHHHHH | xbxbxaaaaxaaaaaaaaaa |
1e3m_B_196 | 1e3m | B | 196 | 215 | LRRRPLWEFEIDTARQQLNL | EEEE-SGGG-HHHHHHHHHH | xbxbpaaaaxaaaaaaaaaa |
1h6d_A_204 | 1h6d | A | 204 | 223 | LMIGYRCHYDPMNRAAVKLI | EEE--GGGG-HHHHHHHHHH | bbxxxaaaaxaaaaaaaaaa |
1lc0_A_120 | 1lc0 | A | 120 | 139 | LHEEHVELLMEEFEFLRREV | EEEE-GGGGSHHHHHHHHHH | bbbxbaaaaxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e3m_A_196 | 1e3m | A | MSESELENOMETHIONINE | L - 196 |
1e3m_A_196 | 1e3m | A | MSESELENOMETHIONINE | R - 198 |
1h6d_A_204 | 1h6d | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | G - 207 |
1h6d_A_204 | 1h6d | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Y - 208 |
1h6d_A_204 | 1h6d | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | R - 209 |
1h6d_A_204 | 1h6d | A | GOLGLYCEROL | R - 209 |
Clusters included in this Subclass |
CLUSTER: EH.6.155 |