ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.1.1

Subclass Accession number: 1542
Subclass: 8.1.1

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.5 (>75 %)  3.5.2 (>75 %)  3.5.2.6
GO : GO:0008415 (>75 %)  GO:0008415 (>75 %)  GO:0008800 (>75 %)  GO:0016746 (>75 %)  GO:0016746 (>75 %)  GO:0016747 (>75 %)  GO:0016747 (>75 %)  GO:0016810 (>75 %)  GO:0016812 (>75 %)
SCOP : 55728 (>75 %)  55728 (>75 %)  55729 (>75 %)  55729 (>75 %)  55730 (>75 %)  55730 (>75 %)  56600 (>75 %)  56601 (>75 %)  56602 (>75 %)

Number of loops: 11

Average sequence ID (%) : 23.6 +/- 20.3
Average RMSD (Å) : 0.336 +/- 0.121

Consensus geometry

d (Å): 7

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	hhXXpXpXpXhh
(φψ)-conformation:	bbpaaaplagaa

Pattern:	[acglv]	[ILTV]	x	[ekprs]	[DKNPQS]	x	[EQR]	[gknqr]	[knqr]	[GQR]	[hily]	[AGV]	[kpst]	x	[ALM]	[AILMVY]	[adeknr]
Conservation:	-0.961	1.372	-0.980	-0.425	-0.269	-0.973	1.705	-0.782	0.553	0.932	-0.412	1.194	-0.342	-1.097	1.504	0.059	-1.076

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bob_*_213	1bob	-	221	237	LIFPPYQNKGHGSCLYE	EE-GGG-SSSHHHHHHH	bbpaaaxlagaaaaaaa
1cjw_A_118	1cjw	A	125	141	AVHRSFRQQGKGSVLLW	EE-TTSTTSSHHHHHHH	bbpaaaxvavaaaaaaa
1fy7_A_305	1fy7	A	306	322	LTLPQYQRMGYGKLLIE	EE-GGG-SSSHHHHHHH	bbpaaaxvavaaaaaaa
1i12_A_93	1i12	A	101	117	AVNSKYQGQGLGKLLID	EE-GGGTTSSHHHHHHH	bbpaaaxvavaaaaaaa
1iyk_A_167	1iyk	A	178	194	CIHKKLRNKRLAPVLIK	EE-GGGTTSS-HHHHHH	bbpaaaxvalaaaaaaa
1m44_A_74	1m44	A	85	101	AVRADWRGQRLVSALLD	EE-GGGTTSSHHHHHHH	bbpaaaxvavaaaaaaa
1n71_A_70	1n71	A	77	93	VVESSRRKNQIGTRLVN	EE-TTS-SSSHHHHHHH	bbpaaaxvavaaaaaaa
1p0h_A_77	1p0h	A	81	97	VVHPQSRRRGIGTAMAR	EE-GGG-SSSHHHHHHH	bbpaaaxvavaaaaaaa
1qst_A_120	1qst	A	127	143	AVTANEQVRGYGTRLMN	EE-GGG-SSSHHHHHHH	bbpaaaxlavaaaaaaa
1sqh_A_238	1sqh	A	238	254	QVLPKAERRGLGGLLAA	EE-GGG-SSSHHHHHHH	bbpaaaxlavaaaaaaa
1ufh_A_88	1ufh	A	95	111	GLYEPYRGKGYAKQALA	EE-GGG-SSSHHHHHHH	bbxaaaxvavaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	I - 217
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	S - 218
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	Q - 219
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	F - 220
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	L - 221
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	I - 222
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	F - 223
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	Y - 226
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	Q - 227
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	N - 228
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	K - 229
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	G - 230
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	H - 231
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	G - 232
1bob_*_213	1bob	*	ACOACETYL COENZYME *A	S - 233
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	L - 121
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	H - 122
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	A - 123
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	L - 124
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	A - 125
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	V - 126
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	H - 127
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	F - 130
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	R - 131
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	Q - 132
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	Q - 133
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	G - 134
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	K - 135
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	G - 136
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	S - 137
1cjw_A_118	1cjw	A	COTCOA-S-ACETYL TRYPTAMINE	V - 138
1fy7_A_305	1fy7	A	COACOENZYME A	I - 305
1fy7_A_305	1fy7	A	COACOENZYME A	L - 306
1fy7_A_305	1fy7	A	COACOENZYME A	T - 307
1fy7_A_305	1fy7	A	COACOENZYME A	L - 308
1fy7_A_305	1fy7	A	COACOENZYME A	Y - 311
1fy7_A_305	1fy7	A	COACOENZYME A	Q - 312
1fy7_A_305	1fy7	A	COACOENZYME A	R - 313
1fy7_A_305	1fy7	A	COACOENZYME A	M - 314
1fy7_A_305	1fy7	A	COACOENZYME A	G - 315
1fy7_A_305	1fy7	A	COACOENZYME A	Y - 316
1fy7_A_305	1fy7	A	COACOENZYME A	G - 317
1fy7_A_305	1fy7	A	COACOENZYME A	K - 318
1fy7_A_305	1fy7	A	COACOENZYME A	L - 319
1fy7_A_305	1fy7	A	COACOENZYME A	L - 320
1i12_A_93	1i12	A	IMDIMIDAZOLE	H - 96
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	I - 97
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	E - 98
1i12_A_93	1i12	A	IMDIMIDAZOLE	E - 98
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	D - 99
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	I - 100
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	A - 101
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	V - 102
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	N - 103
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	Y - 106
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	Q - 107
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	G - 108
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	Q - 109
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	G - 110
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	L - 111
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	G - 112
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	K - 113
1i12_A_93	1i12	A	ACOACETYL COENZYME *A	L - 114
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	V - 172
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	I - 174
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	N - 175
1iyk_A_167	1iyk	A	MIM[CYCLOHEXYLETHYL]-[[[[4-[2-METHYL-1-IMIDAZOLYL-BUTYL] PHENYL]ACETYL]-SERYL]-LYSINYL]-AMINE	N - 175
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	F - 176
1iyk_A_167	1iyk	A	MIM[CYCLOHEXYLETHYL]-[[[[4-[2-METHYL-1-IMIDAZOLYL-BUTYL] PHENYL]ACETYL]-SERYL]-LYSINYL]-AMINE	F - 176
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	L - 177
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	C - 178
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	I - 179
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	H - 180
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	L - 183
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	R - 184
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	N - 185
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	K - 186
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	R - 187
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	L - 188
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	A - 189
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	P - 190
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	L - 192
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	I - 193
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	I - 196
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	T - 197
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	V - 200
1iyk_A_167	1iyk	A	MYATETRADECANOYL-COA	N - 201
1n71_A_70	1n71	A	COACOENZYME A	L - 73
1n71_A_70	1n71	A	COACOENZYME A	L - 76
1n71_A_70	1n71	A	COACOENZYME A	V - 77
1n71_A_70	1n71	A	COACOENZYME A	V - 78
1n71_A_70	1n71	A	COACOENZYME A	E - 79
1n71_A_70	1n71	A	COACOENZYME A	R - 82
1n71_A_70	1n71	A	COACOENZYME A	R - 83
1n71_A_70	1n71	A	COACOENZYME A	K - 84
1n71_A_70	1n71	A	COACOENZYME A	N - 85
1n71_A_70	1n71	A	COACOENZYME A	Q - 86
1n71_A_70	1n71	A	COACOENZYME A	I - 87
1n71_A_70	1n71	A	COACOENZYME A	G - 88
1n71_A_70	1n71	A	COACOENZYME A	T - 89
1n71_A_70	1n71	A	COACOENZYME A	R - 90
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	L - 80
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	V - 81
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	V - 82
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	H - 83
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	S - 86
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	R - 87
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	R - 88
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	R - 89
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	G - 90
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	I - 91
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	G - 92
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	T - 93
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	A - 94
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	M - 95
1p0h_A_77	1p0h	A	ACOACETYL COENZYME *A	A - 96
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	L - 126
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	A - 127
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	V - 128
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	E - 132
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	Q - 133
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	V - 134
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	R - 135
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	G - 136
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	Y - 137
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	G - 138
1qst_A_120	1qst	A	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	T - 139
1sqh_A_238	1sqh	A	MSESELENOMETHIONINE	Q - 238
1sqh_A_238	1sqh	A	MSESELENOMETHIONINE	L - 251
1sqh_A_238	1sqh	A	MSESELENOMETHIONINE	L - 252
1sqh_A_238	1sqh	A	MSESELENOMETHIONINE	A - 253
1sqh_A_238	1sqh	A	MSESELENOMETHIONINE	A - 254

Clusters included in this Subclass

CLUSTER: EH.8.0