Logo
Information on SUBCLASS 9.28.1
Subclass Accession number: 3544
Subclass: 9.28.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004089 (>75 %)  GO:0008270 (>75 %)  GO:0016829 (>75 %)  GO:0016835 (>75 %)  GO:0016836 (>75 %)  GO:0046914 (>75 %)  
SCOP : 53040 (>75 %)  53056 (>75 %)  53057 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 74.1 +/- -30.7
Average RMSD (Å) : 0.133 +/- 0.058

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: RNhANXhIHpDhp
(φψ)-conformation: bbpllpbpaapaa
Pattern: [LV][F][V][H][R][N][IV][A][N]x[CV][I][H][ST][D][ILM][NS][CF][L][S][V][LV][Q][Y][A][V][DQ]
Conservation:-1.0180.994-0.1562.1440.4190.994-0.443-0.1560.994-1.731-0.847-0.1562.144-0.8790.994-0.986-0.741-0.889-0.156-0.156-0.156-1.0180.4191.569-0.156-0.156-0.879
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ddz_A_1671ddz   A167193VFVHRNIANQCIHSDISFLSVLQYAVQEEEEEEGGG---TT-HHHHHHHHHHHHbxbbbbxvlxbxaaxaaaaaaaaaaaa
1ddz_A_4211ddz   A421447VFVHRNIANQCIHSDMSFLSVLQYAVQEEEEEETT----TT-HHHHHHHHHHHHbxbbbbxvlxbxaaxaaaaaaaaaaaa
1i6p_A_601i6p   A6086LFVHRNVANLVIHTDLNCLSVVQYAVDEEEEEETT----TT-HHHHHHHHHHHHbbbbbbxvlxbxaaxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ddz_A_1671ddz   A     ZNZINC ION A - 174
1ddz_A_1671ddz   A     ZNZINC ION N - 175
1ddz_A_4211ddz   A     ZNZINC ION I - 427
1ddz_A_4211ddz   A     ZNZINC ION A - 428
1ddz_A_4211ddz   A     ZNZINC ION N - 429
1i6p_A_601i6p   A     ZNZINC ION V - 66
1i6p_A_601i6p   A     ZNZINC ION A - 67
1i6p_A_601i6p   A     ZNZINC ION N - 68

Clusters included in this Subclass
CLUSTER: EH.8.135