ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.8.1

Subclass Accession number: 1563
Subclass: 9.8.1

Type: EH beta-alpha
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.7.1 (>75 %)  2.7.1.36 3.4 (>75 %)  3.4.17 (>75 %)
GO : GO:0004180 (>75 %)  GO:0004496 (>75 %)  GO:0005524 (>75 %)  GO:0008233 (>75 %)  GO:0008235 (>75 %)  GO:0008237 (>75 %)  GO:0008238 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0030554 (>75 %)
SCOP : 51734 (>75 %)  51735 (>75 %)  51751 (>75 %)  54210 (>75 %)  54211 (>75 %)  54232 (>75 %)  54861 (>50 %)  54897 (>50 %)  54898 (>50 %)

Number of loops: 3

Average sequence ID (%) : 37.3 +/- 15.0
Average RMSD (Å) : 0.433 +/- 0.115

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	hhPYXYXXpXhXc
(φψ)-conformation:	bbwwaababppaa

Pattern:	[LM]	[LM]	[ILM]	[FY]	[P]	[Y]	[GS]	[Y]	[AKT]	[CTY]	[KQT]	x	[GIL]	[DEP]	[DN]	x	[ADT]	[E]	[L]	[NS]	[AEQ]	[LV]	[A]	[KQ]	[AKS]	[AT]	[AV]	[AKQ]	[AES]	[L]	[AKR]	[S]	[L]	[HY]
Conservation:	0.134	0.134	-0.214	1.093	2.186	2.186	-0.054	2.186	-0.994	-0.934	-0.814	-1.294	-1.474	-0.514	0.365	-1.294	-1.054	1.106	0.566	0.222	-0.754	-0.203	0.566	0.090	-0.814	-0.378	-0.450	-0.874	-0.814	0.566	-0.754	0.566	0.566	1.152

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aye_*_201	1aye	-	201	234	LLMFPYGYKCTKLDDFDELSEVAQKAAQSLRSLH	EEEES-SSS-S--TTHHHHHHHHHHHHHHHHHHH	bbbbwwaababxxaaaaaaaaaaaaaaaaaaaaa
1kwm_A_201	1kwm	A	201	234	MMIYPYSYAYKLGENNAELNALAKATVKELASLH	EEEES-SSSS---TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabxbbxaaaaaaaaaaaaaaaaaaaaa
1m4l_A_201	1m4l	A	201	234	LLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLY	EEEES-SS-S---TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabapxxaaaaaaaaaaaaaaaaaaaaa

Clusters included in this Subclass