ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 10.3.1

Subclass Accession number: 6569
Subclass: 10.3.1

Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 7

Average sequence ID (%) : 39.9 +/- 31.3
Average RMSD (Å) : 0.671 +/- 0.180

Consensus geometry

d (Å): 15

delta (°): 0-45

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	XhhPXXXpXpXXXh
(φψ)-conformation:	bbpppaaaaapabb

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	-0.389	0.788	0.017	-0.823	-0.189	0.482	2.270	-0.864	-1.386	-0.267	0.137	-0.338	-0.425	-0.573	-0.453	-1.228	-0.135	0.211	0.096	-0.833	3.259	-0.090	0.115	-0.392	-0.190	1.199

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a0q_L_114	1a0q	L	114	139	TVSIFPPSSEQLTSGGASVVCFLNNF	EEEEE---TTGGGTTEEEEEEEEEEE	bxbxbxpxaaaaaxabbbbbbxbxlb
1cqk_A_8	1cqk	A	8	33	QVYTIPPPLEQMAKDLVSLTCMITDF	EEEEE---GGGTTSSEEEEEEEEEEE	xbbbbwxxaaaaaxabbbbbbxbblb
1dqd_L_113	1dqd	L	113	138	TVSIFPPSSEQLTSGGASVVCFLNNF	EEEEE---TTGGGSSEEEEEEEEEEE	xbbbbxpxaaaaaxabbbbbbbbblb
1jpt_L_114	1jpt	L	114	139	SVFIFPPSDEQLKSGTASVVCLLNNF	EEEEE---TTGGGSSEEEEEEEEEEE	xbbbbwxxaaaaababbbbbbbbblb
1l6x_A_347	1l6x	A	347	372	QVYTLPPSRDELTKNQVSLTCLVKGF	EEEEE---GGGGGSSEEEEEEEEEEE	bbbxbwxxaaaaaxabbbbbbxbbvx
1lo0_H_126	1lo0	H	126	151	SVYPLAPVCGDTTGSSVTLGCLVKGY	EEEEE---TTTTSSSEEEEEEEEEEE	bbbwbxpxaaaaababbbbbbbxblb
1ncw_H_120	1ncw	H	120	145	SVYPLAPVCGDTTGSSVTLGCLVKGY	EEEEE---GGGSSSSEEEEEEEEEEE	xbbxbxxxaaaaaxabbbbbbbbbvb

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass