Information on SUBCLASS 14.1.1 |
Subclass Accession number: 6603
Subclass: 14.1.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 32.1 +/- 22.5 Average RMSD (Å) : 0.425 +/- 0.104 Consensus geometry
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Consensus Sequence: | XGWGpXXpcGXXXXXLXX |
(φψ)-conformation: | beappabplppppappbb |
Pattern: | [afimptv] | [cfi] | [qstwy] | [ILV] | [AST] | [G] | [W] | [G] | [aqrs] | x | x | x | [GNQR] | [GM] | [anrst] | [gqst] | [APQST] | x | x | [LP] | [mqr] | [efkq] | [AGILV] | [DENQ] | [ILV] | x |
Conservation: | -0.803 | 0.084 | -0.651 | 0.504 | 0.084 | 1.674 | 3.626 | 1.674 | -0.401 | -0.530 | -0.722 | -0.794 | -0.169 | 0.577 | -0.488 | -0.519 | -0.372 | -0.695 | -0.741 | 0.073 | -0.106 | -0.482 | -0.546 | 0.152 | 0.338 | -0.770 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a7s_*_122 | 1a7s | - | 122 | 147 | RCQVAGWGSQRSGGRLSRFPRFVNVT | EEEEEES--SSTT----SS-EEEEEE | xbbbbeaxxabxvxxxxaxxbbbxbb |
1bru_P_135 | 1bru | P | 135 | 160 | VCYVTGWGRLQTNGASPDILQQGQLL | EEEEEES--SSTTS---SB-EEEEEE | xbbxbeaxpabpUxxxxaxpbbbxbx |
1eax_A_135 | 1eax | A | 135 | 160 | AIWVTGWGHTQYGGTGALILQKGEIR | EEEEEESSBSSTTS-B-SB-EEEEEE | xbbbbeaxpabxvxbxxaxpbbbxbb |
1ekb_B_135 | 1ekb | B | 135 | 160 | ICSIAGWGALIYQGSTADVLQEADVP | EEEEEESSBSSTTS-B-SB-EEEEEE | xbbbbbaxpabpvxxxxaxpxbbbbx |
1eq9_A_135 | 1eq9 | A | 135 | 160 | PCTLTGWGSTRLGGNTPNALQEIELI | EEEEEE---SSTT----SB-EEEEEE | wbbbbeaxpabxvxxxxaxpbbbxbb |
1euf_A_135 | 1euf | A | 135 | 160 | MCSVAGWGRLGVNMPSTDKLQEVDLE | EEEEEES-BSSTT--B-SB-EEEEEE | xbbbbeaxpaexlbxxxabpbbbxbb |
1kli_H_135 | 1kli | H | 135 | 160 | FSLVSGWGQLLDRGATALELMVLNVP | EEEEEES-BSSTT--B-SB-EEEEEE | bbxbbeaxpabxvbxxxabpbbbxbx |
1os8_A_135 | 1os8 | A | 135 | 160 | TFTVAGWGANREGGSQQRYLLKANVP | EEEEEESS-SSTT----SB-EEEEEE | bxbbbeaxpabxvxxxxabpbbbbbw |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a7s_*_122 | 1a7s | * | NAGN-ACETYL-D-GLUCOSAMINE | R - 122 |
1a7s_*_122 | 1a7s | * | NAGN-ACETYL-D-GLUCOSAMINE | Q - 124 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | Q - 124 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | V - 125 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | A - 126 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | G - 127 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | W - 128 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | S - 130 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | R - 132 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | S - 133 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | G - 134 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | G - 135 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | R - 136 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | P - 141 |
1a7s_*_122 | 1a7s | * | NAGN-ACETYL-D-GLUCOSAMINE | F - 143 |
1a7s_*_122 | 1a7s | * | EOHETHANOL | F - 143 |
1a7s_*_122 | 1a7s | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 144 |
1a7s_*_122 | 1a7s | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 145 |
Clusters included in this Subclass |
CLUSTER: HA.13.2 |