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Information on SUBCLASS 14.1.1
Subclass Accession number: 6603
Subclass: 14.1.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 32.1 +/- 22.5
Average RMSD (Å) : 0.425 +/- 0.104

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XGWGpXXpcGXXXXXLXX
(φψ)-conformation: beappabplppppappbb
Pattern: [afimptv][cfi][qstwy][ILV][AST][G][W][G][aqrs]xxx[GNQR][GM][anrst][gqst][APQST]xx[LP][mqr][efkq][AGILV][DENQ][ILV]x
Conservation:-0.8030.084-0.6510.5040.0841.6743.6261.674-0.401-0.530-0.722-0.794-0.1690.577-0.488-0.519-0.372-0.695-0.7410.073-0.106-0.482-0.5460.1520.338-0.770
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7s_*_1221a7s   -122147RCQVAGWGSQRSGGRLSRFPRFVNVTEEEEEES--SSTT----SS-EEEEEExbbbbeaxxabxvxxxxaxxbbbxbb
1bru_P_1351bru   P135160VCYVTGWGRLQTNGASPDILQQGQLLEEEEEES--SSTTS---SB-EEEEEExbbxbeaxpabpUxxxxaxpbbbxbx
1eax_A_1351eax   A135160AIWVTGWGHTQYGGTGALILQKGEIREEEEEESSBSSTTS-B-SB-EEEEEExbbbbeaxpabxvxbxxaxpbbbxbb
1ekb_B_1351ekb   B135160ICSIAGWGALIYQGSTADVLQEADVPEEEEEESSBSSTTS-B-SB-EEEEEExbbbbbaxpabpvxxxxaxpxbbbbx
1eq9_A_1351eq9   A135160PCTLTGWGSTRLGGNTPNALQEIELIEEEEEE---SSTT----SB-EEEEEEwbbbbeaxpabxvxxxxaxpbbbxbb
1euf_A_1351euf   A135160MCSVAGWGRLGVNMPSTDKLQEVDLEEEEEEES-BSSTT--B-SB-EEEEEExbbbbeaxpaexlbxxxabpbbbxbb
1kli_H_1351kli   H135160FSLVSGWGQLLDRGATALELMVLNVPEEEEEES-BSSTT--B-SB-EEEEEEbbxbbeaxpabxvbxxxabpbbbxbx
1os8_A_1351os8   A135160TFTVAGWGANREGGSQQRYLLKANVPEEEEEESS-SSTT----SB-EEEEEEbxbbbeaxpabxvxxxxabpbbbbbw
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a7s_*_1221a7s   *     NAGN-ACETYL-D-GLUCOSAMINE R - 122
1a7s_*_1221a7s   *     NAGN-ACETYL-D-GLUCOSAMINE Q - 124
1a7s_*_1221a7s   *     EOHETHANOL Q - 124
1a7s_*_1221a7s   *     EOHETHANOL V - 125
1a7s_*_1221a7s   *     EOHETHANOL A - 126
1a7s_*_1221a7s   *     EOHETHANOL G - 127
1a7s_*_1221a7s   *     EOHETHANOL W - 128
1a7s_*_1221a7s   *     EOHETHANOL S - 130
1a7s_*_1221a7s   *     EOHETHANOL R - 132
1a7s_*_1221a7s   *     EOHETHANOL S - 133
1a7s_*_1221a7s   *     EOHETHANOL G - 134
1a7s_*_1221a7s   *     EOHETHANOL G - 135
1a7s_*_1221a7s   *     EOHETHANOL R - 136
1a7s_*_1221a7s   *     EOHETHANOL P - 141
1a7s_*_1221a7s   *     NAGN-ACETYL-D-GLUCOSAMINE F - 143
1a7s_*_1221a7s   *     EOHETHANOL F - 143
1a7s_*_1221a7s   *     NAGN-ACETYL-D-GLUCOSAMINE V - 144
1a7s_*_1221a7s   *     NAGN-ACETYL-D-GLUCOSAMINE N - 145

Clusters included in this Subclass
CLUSTER: HA.13.2