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Information on SUBCLASS 2.1.3
Subclass Accession number: 7728
Subclass: 2.1.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 13.4 +/- 14.1
Average RMSD (Å) : 0.571 +/- 0.168

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXXcpX
(φψ)-conformation: bblgbp
Pattern: xx[eqty][giklmtv][egkqrt]xx[degn][eknqrst][ekpqrt]xxxx
Conservation:-0.647-0.8450.291-0.378-0.003-0.622-0.2682.9040.4240.728-0.031-1.1870.347-0.713
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ckm_A_861ckm   A90103MFFTRVFGFKVCTIEEEEEETTEEEEEEbbxbbblvxxbbbb
1d06_A_2251d06   A232245VGEMRSGGERFFTGEEEEEETTEEEEEEbbbbbbvvbbbbbb
1f0l_A_5081f0l   A513526GYQKTVDHTKVNSKEEEEEETTEEEEEEbxxbbbllbxbbpb
1i24_A_1601i24   A160173YITITHNGRTDTLPEEEEEETTEEEEEEbbxbbblvbbbbbx
1ida_A_531ida   A6174NVEIEVLNKKVRATEEEEEETTEEEEEElxxbbblvbbbbbx
1iic_A_1451iic   A153166PVTLGVRGKQVPSVEEEEEETTEEEEEExbbxbblgxxbpbb
1j7n_A_5251j7n   A532545VQIIKQSEKEYIRIEEEEEETTEEEEEEbbxbbblvbxbbxb
1kxr_A_2741kxr   A279292AKQVTYQGQRVNLIEEEEEETTEEEEEEbbbbbblvbxbxbb
1m6d_A_1591m6d   A164177VGYGQRSDVPFWAIEEEEEETTEEEEEEabbebbvvbwbbxb
1mdw_A_2641mdw   A269282AEEVESSGSLQKLIEEEEEETTEEEEEEbbbbxblvbxbxbb
1mem_A_1591mem   A164177VGYGIQKGNKHWIIEEEEEETTEEEEEEaebbbblvbxbbxb
1oh0_A_811oh0   A87100RVEMVWNGQPCALDEEEEESSSSEEEEEbbbbbblvbwbbbx
1qht_A_671qht   A7083KVQKKFLGRPIEVWEEEEEETTEEEEEExbbbbbvvbwbbbb
1sml_A_1651sml   A168181TWTDTRNGKPVRIAEEEEEETTEEEEEEbbbbbblvbpbxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ckm_A_861ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE I - 86
1ckm_A_861ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE R - 87
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 228
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 230
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 232
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 233
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 243
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 244
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 245
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 246
1d06_A_2251d06   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 247
1ida_A_531ida   A     PY23-(MERCAPTOMETHYLENE)PYRIDINE F - 53
1ida_A_531ida   A     PPLPIPERIDINE-2-CARBOXYLIC ACID TERT-BUTYLAMIDE M - 76
1iic_A_1451iic   A     MYATETRADECANOYL-COA I - 149
1iic_A_1451iic   A     MYATETRADECANOYL-COA V - 166
1iic_A_1451iic   A     MYATETRADECANOYL-COA I - 168
1iic_A_1451iic   A     MYATETRADECANOYL-COA N - 169
1iic_A_1451iic   A     MYATETRADECANOYL-COA F - 170
1iic_A_1451iic   A     MYATETRADECANOYL-COA L - 171
1iic_A_1451iic   A     MYATETRADECANOYL-COA C - 172
1iic_A_1451iic   A     MYATETRADECANOYL-COA V - 173
1mem_A_1591mem   A     NFP3-AMINO-5-PHENYLPENTANE H - 159
1mem_A_1591mem   A     BNSBENZENESULFONYL H - 159
1mem_A_1591mem   A     NFP3-AMINO-5-PHENYLPENTANE A - 160
1mem_A_1591mem   A     BNSBENZENESULFONYL A - 160
1oh0_A_811oh0   A     EQUEQUILENIN M - 84
1oh0_A_811oh0   A     EQUEQUILENIN F - 86
1oh0_A_811oh0   A     EQUEQUILENIN V - 88
1oh0_A_811oh0   A     EQUEQUILENIN M - 90
1oh0_A_811oh0   A     EQUEQUILENIN V - 91
1oh0_A_811oh0   A     EQUEQUILENIN L - 99
1oh0_A_811oh0   A     EQUEQUILENIN V - 101
1oh0_A_811oh0   A     EQUEQUILENIN D - 103
1oh0_A_811oh0   A     EQUEQUILENIN M - 105
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1mem_A_1591mem   A CATDESCRIPTION NOT PROVIDEDH - 159
1oh0_A_811oh0   A AC1EQU BINDING SITE FOR CHAIN AF - 86
1oh0_A_811oh0   A AC1EQU BINDING SITE FOR CHAIN AM - 90
1oh0_A_811oh0   A AC1EQU BINDING SITE FOR CHAIN AD - 103

Clusters included in this Subclass
CLUSTER: HA.1.28
CLUSTER: HA.3.29