Information on SUBCLASS 2.1.3 |
Subclass Accession number: 7728
Subclass: 2.1.3 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 13.4 +/- 14.1 Average RMSD (Å) : 0.571 +/- 0.168 Consensus geometry
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Consensus Sequence: | pXXcpX |
(φψ)-conformation: | bblgbp |
Pattern: | x | x | [eqty] | [giklmtv] | [egkqrt] | x | x | [degn] | [eknqrst] | [ekpqrt] | x | x | x | x |
Conservation: | -0.647 | -0.845 | 0.291 | -0.378 | -0.003 | -0.622 | -0.268 | 2.904 | 0.424 | 0.728 | -0.031 | -1.187 | 0.347 | -0.713 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ckm_A_86 | 1ckm | A | 90 | 103 | MFFTRVFGFKVCTI | EEEEEETTEEEEEE | bbxbbblvxxbbbb |
1d06_A_225 | 1d06 | A | 232 | 245 | VGEMRSGGERFFTG | EEEEEETTEEEEEE | bbbbbbvvbbbbbb |
1f0l_A_508 | 1f0l | A | 513 | 526 | GYQKTVDHTKVNSK | EEEEEETTEEEEEE | bxxbbbllbxbbpb |
1i24_A_160 | 1i24 | A | 160 | 173 | YITITHNGRTDTLP | EEEEEETTEEEEEE | bbxbbblvbbbbbx |
1ida_A_53 | 1ida | A | 61 | 74 | NVEIEVLNKKVRAT | EEEEEETTEEEEEE | lxxbbblvbbbbbx |
1iic_A_145 | 1iic | A | 153 | 166 | PVTLGVRGKQVPSV | EEEEEETTEEEEEE | xbbxbblgxxbpbb |
1j7n_A_525 | 1j7n | A | 532 | 545 | VQIIKQSEKEYIRI | EEEEEETTEEEEEE | bbxbbblvbxbbxb |
1kxr_A_274 | 1kxr | A | 279 | 292 | AKQVTYQGQRVNLI | EEEEEETTEEEEEE | bbbbbblvbxbxbb |
1m6d_A_159 | 1m6d | A | 164 | 177 | VGYGQRSDVPFWAI | EEEEEETTEEEEEE | abbebbvvbwbbxb |
1mdw_A_264 | 1mdw | A | 269 | 282 | AEEVESSGSLQKLI | EEEEEETTEEEEEE | bbbbxblvbxbxbb |
1mem_A_159 | 1mem | A | 164 | 177 | VGYGIQKGNKHWII | EEEEEETTEEEEEE | aebbbblvbxbbxb |
1oh0_A_81 | 1oh0 | A | 87 | 100 | RVEMVWNGQPCALD | EEEEESSSSEEEEE | bbbbbblvbwbbbx |
1qht_A_67 | 1qht | A | 70 | 83 | KVQKKFLGRPIEVW | EEEEEETTEEEEEE | xbbbbbvvbwbbbb |
1sml_A_165 | 1sml | A | 168 | 181 | TWTDTRNGKPVRIA | EEEEEETTEEEEEE | bbbbbblvbpbxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1mem_A_159 | 1mem | A | CATDESCRIPTION NOT PROVIDED | H - 159 |
1oh0_A_81 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | F - 86 |
1oh0_A_81 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | M - 90 |
1oh0_A_81 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | D - 103 |
Clusters included in this Subclass |
CLUSTER: HA.1.28 |
CLUSTER: HA.3.29 |