Information on SUBCLASS 2.1.9 |
Subclass Accession number: 6043
Subclass: 2.1.9 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 7.4 +/- 10.5 Average RMSD (Å) : 0.477 +/- 0.130 Consensus geometry
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Consensus Sequence: | XXpXph |
(φψ)-conformation: | bblgbp |
Pattern: | [fgltv] | x | x | x | x | [dhnqsy] | [degknqs] | [aenqrst] | [cflmpvwy] | x |
Conservation: | -1.049 | -0.635 | -0.789 | -0.835 | 0.049 | 0.804 | 2.028 | 1.082 | -0.212 | -0.444 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bxo_A_17 | 1bxo | A | 19 | 28 | TPVTIGGTTL | EEEEETTEEE | bwbbblvbxb |
1ea5_A_18 | 1ea5 | A | 18 | 27 | TRVPVLSSHI | EEEEETTEEE | bxbwblvbbb |
1ekm_A_275 | 1ekm | A | 281 | 290 | VSYNDHGNVR | EEEEETTEEE | xbbxxlgxxb |
1fon_A_10 | 1fon | A | 16 | 25 | LQYEKDGAFH | EEEEETTEEE | xbbxblvbxb |
1gj7_B_198 | 1gj7 | B | 199 | 208 | LVCSLQGRMT | EEEEETTEEE | bbbxblvbxb |
1gvk_B_198 | 1gvk | B | 199 | 208 | LHCLVNGQYA | EEEEETTEEE | bxbxblvbxb |
1hkk_A_53 | 1hkk | A | 58 | 67 | FAGMTNHQLS | EEEEETTEEE | wxbbblvbpb |
1iqw_H_92 | 1iqw | H | 98 | 107 | RNRDYSNNWY | EEEEETTEEE | xxbbblvxxb |
1jlx_A_174 | 1jlx | A | 176 | 185 | GVITINQLPC | EEEEETTEEE | bxbxblvbwx |
1n08_A_63 | 1n08 | A | 67 | 76 | GYAMVQKRVF | EEEEETTEEE | ebbbblvbbb |
1n9e_A_420 | 1n9e | A | 424 | 433 | TDTFEYDEFY | EEEEETTEEE | bbbbblvbxb |
1qy1_A_51 | 1qy1 | A | 56 | 65 | FHTVRDEECS | EEEEETTEEE | bbbbblvbxb |
1thf_D_125 | 1thf | D | 130 | 139 | DAKRVDGEFM | EEEEETTEEE | xbbxblvbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1bxo_A_17 | 1bxo | A | CICCATALYTIC RESIDUES | D - 33 |
1hkk_A_53 | 1hkk | A | AC2NAA BINDING SITE FOR CHAIN A | F - 58 |
1hkk_A_53 | 1hkk | A | AC8ZN2 BINDING SITE FOR CHAIN A | H - 64 |
Clusters included in this Subclass |
CLUSTER: HA.1.138 |
CLUSTER: HA.1.69 |
CLUSTER: HA.2.37 |