Logo
Information on SUBCLASS 2.2.21
Subclass Accession number: 491
Subclass: 2.2.21 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 8.6 +/- 12.1
Average RMSD (Å) : 0.650 +/- 0.138

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hhpppX
(φψ)-conformation: bbaabb
Pattern: x[deht][filv][acgs][DENST][DKRS][hsy][ilty][agv]x[ADKQS][FILV]xx
Conservation:-0.094-0.0320.070-0.6871.1910.9161.000-0.504-0.471-1.6780.3781.824-1.533-0.381
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ju2_A_3181ju2   A319332LGISNDFYQCSFSSEEE-SSEEEEEEEEbbxbaabbbbbbbb
1mpg_A_281mpg   A2841ETVADSYYARSLAVEEE-SS-EEEEEEEbbbbaabbbbxbbb
1nu0_A_81nu0   A821FDFGTKSIGVAVGQEE--SSEEEEEEEEbbxbaabbxbbbbb
1p15_A_6581p15   A658670.EECESYTVRDLLV.EE-SSEEEEEEEE.bxxaabbxbxbbx
1qy1_A_411qy1   A4558IHVLEKSLVLKFHTEEE-SSEEEEEEEEbbxbaabbxbbbbb
1vh5_A_971vh5   A105118LHLGSRHQVWQIEIEEE-SSEEEEEEEEabbxaabbbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ju2_A_3181ju2   A     NAGN-ACETYL-D-GLUCOSAMINE I - 321
1ju2_A_3181ju2   A     NAGN-ACETYL-D-GLUCOSAMINE S - 322
1ju2_A_3181ju2   A     NAGN-ACETYL-D-GLUCOSAMINE N - 323
1ju2_A_3181ju2   A     NAGN-ACETYL-D-GLUCOSAMINE D - 324
1ju2_A_3181ju2   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 326
1nu0_A_81nu0   A     MSESELENOMETHIONINE F - 8
1nu0_A_81nu0   A     MSESELENOMETHIONINE V - 17
1nu0_A_81nu0   A     MSESELENOMETHIONINE A - 18
1nu0_A_81nu0   A     MSESELENOMETHIONINE V - 19
1nu0_A_81nu0   A     MSESELENOMETHIONINE G - 20
1nu0_A_81nu0   A     MSESELENOMETHIONINE Q - 21
1qy1_A_411qy1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 42
1qy1_A_411qy1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 54
1qy1_A_411qy1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE F - 56

Clusters included in this Subclass
CLUSTER: HA.2.117
CLUSTER: HA.3.158
CLUSTER: HA.4.132
CLUSTER: HA.4.180