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Information on SUBCLASS 2.2.23
Subclass Accession number: 493
Subclass: 2.2.23 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0030151 (>75 %)  GO:0046914 (>50 %)  
SCOP : 50684 (>50 %)  50692 (>50 %)  50696 (>50 %)  
Number of loops: 5

Average sequence ID (%) : 15.3 +/- 15.3
Average RMSD (Å) : 0.640 +/- 0.288

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XppXGX
(φψ)-conformation: bbaaeb
Pattern: x[CDV][lmtv][fiv]x[CNST][DEHK][knrw][G]x[FILT][FKTV][AGN]x[GIV]
Conservation:-0.764-0.165-0.371-0.098-0.8950.1540.501-0.6333.270-0.6590.081-0.4450.284-0.5280.268
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cqq_A_141cqq   A1529SCVITTENGKFTGLGEEEEEETTEEEEEEEbbxxbbaaebbxxbx
1eu1_A_61eu1   A721EVMSGCHWGVFKARVEEEEEETTEEEEEEEbbxbbbaaexbbxbb
1g8k_A_7441g8k   A745759IVEVYNDFGSTFAMVEEEEE-SS-EEEEEEbbxbbbaaebbbbxx
1uc8_A_2331uc8   A236250VDLFESERGLLVNEVEEEEEETTEEEEEEExxbbxxaaexbxabb
1vhe_A_1021vhe   A102116RVTIVTKKGEITGVIEEEEEETTEEEEEEExbbxxbaaexbxbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER T - 20
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER N - 22
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER G - 23
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER K - 24
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER F - 25
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER T - 26
1eu1_A_61eu1   A     GLCGLUCOSE E - 7
1eu1_A_61eu1   A     GLCGLUCOSE M - 9
1eu1_A_61eu1   A     GLCGLUCOSE K - 18
1g8k_A_7441g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED G - 753
1g8k_A_7441g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED S - 754
1g8k_A_7441g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED T - 755
1g8k_A_7441g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED F - 756
1g8k_A_7441g8k   A     HGMERCURY (II) ION P - 761
1vhe_A_1021vhe   A     MSESELENOMETHIONINE R - 102
1vhe_A_1021vhe   A     MSESELENOMETHIONINE T - 104
1vhe_A_1021vhe   A     MSESELENOMETHIONINE I - 105
1vhe_A_1021vhe   A     MSESELENOMETHIONINE V - 106
1vhe_A_1021vhe   A     MSESELENOMETHIONINE T - 107
1vhe_A_1021vhe   A     MSESELENOMETHIONINE I - 116

Clusters included in this Subclass
CLUSTER: HA.3.86