ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.2.32

Subclass Accession number: 502
Subclass: 2.2.32

Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  3 (>75 %)  3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.3 5 (>75 %)
GO : GO:0003677 (>75 %)  GO:0004407 (>75 %)  GO:0008270 (>75 %)  GO:0016298 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)  GO:0017136 (>75 %)  GO:0019213 (>75 %)  GO:0046914 (>75 %)
SCOP : 48725 (>50 %)  48726 (>50 %)  49159 (>50 %)  49722 (>75 %)  49723 (>75 %)  49730 (>75 %)  52466 (>75 %)  52467 (>75 %)  63984 (>75 %)

Number of loops: 3

Average sequence ID (%) : 17.6 +/- 15.4
Average RMSD (Å) : 0.533 +/- 0.208

Consensus geometry

d (Å): 5

delta (°): 90-135

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	XNXXXh
(φψ)-conformation:	bbaabb

Pattern:	[RY]	[ITV]	[AC]	[ALT]	[AG]	x	[N]	x	x	[AEG]	[AIM]	x	x	x	x	[AV]	[TW]
Conservation:	0.508	0.029	1.580	-0.560	0.390	-1.076	2.753	-0.708	-0.781	-0.560	-0.413	-0.781	-1.002	0.505	-0.560	0.211	0.467

Loops included in this Subclass

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1gl4_B_1835	1gl4	B	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	V - 1838
1gl4_B_1835	1gl4	B	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	Q - 1849
1gl4_B_1835	1gl4	B	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	G - 1850
1gl4_B_1835	1gl4	B	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	T - 1851

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gl4_B_1835	1gl4	B	EPEEPE BINDING SITE FOR CHAIN B	Q - 1849
1gl4_B_1835	1gl4	B	EPEEPE BINDING SITE FOR CHAIN B	T - 1851

Clusters included in this Subclass