Logo
Information on SUBCLASS 2.3.3
Subclass Accession number: 6104
Subclass: 2.3.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 39

Average sequence ID (%) : 10.0 +/- 12.8
Average RMSD (Å) : 0.518 +/- 0.178

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXcXXX
(φψ)-conformation: bbeabb
Pattern: xxxx[adgknqr]xxxxx
Conservation:-0.085-0.081-0.282-0.3782.7560.002-0.219-0.313-0.560-0.840
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0j_A_301a0j   A3241SLQSGYHFCGEEEETTEEEEbbbxeaxbbx
1azs_A_4321azs   A435444IKILGDCYYCEEEETTEEEEabbbeaxbbb
1b7y_B_2981b7y   B301310AGWRGEESFPEEEETTEEEEbbbbeabbbw
1bxo_A_1921bxo   A197206SYTAGSQSGDEEEETTEEEEbbbbeabbbx
1cs6_A_1771cs6   A184193TSHIDFITKSEEEETTEEEEbbbbeaxbbb
1d2e_A_3771d2e   A377386VMFSLTWDMAEEEETTEEEEbxbbeabbbx
1e79_D_101e79   D1423VAVIGAVVDVEEEETTEEEEabbbeaxbxb
1eov_A_1251eov   A129138TLRQQASLIQEEEETTEEEEbxbbeabbbx
1exm_A_3411exm   A341350QFYFRTTDVTEEEETTEEEExbbbeaxbbx
1fao_A_1811fao   A186195FTLHRNELKYEEEETTEEEEbbbbeabbbb
1gpq_A_421gpq   A4352TVTLGDETYQEEEETTEEEExbbbeabbbb
1h3q_A_591h3q   A6473VDKFNEWFVSEEEETTEEEEabbbeaxxbb
1h6t_A_2931h6t   A301310PVTIGKAKAREEEETTEEEEwbbbeaxbbx
1i5g_A_131i5g   A1322NVLKGAAADIEEEETTEEEEbbxbeabaax
1jmx_A_2371jmx   A241250NVKVGDANLREEEETTEEEEbbxbeabxbx
1jqp_A_751jqp   A8392YEVKGSRAISEEEETTEEEEbbxbeabbbx
1jvn_A_1671jvn   A170179KAKYGSEEFIEEEETTEEEExbbbeaxxbx
1kjq_A_2621kjq   A268277LFVCGDEVIFEEEETTEEEEbbbbeaxbbx
1ksi_A_2371ksi   A237246SVSWANWKFHEEEETTEEEExxbbeabbbb
1lop_A_1411lop   A141150TGRSGMHQDVEEEETTEEEEbbbbeaxxvx
1lvo_A_171lvo   A1928RVSYGNNVLNEEEETTEEEExbbbeaxbbb
1miq_A_1941miq   A198207DVHFGKQTMEEEEETTEEEExbbbeaxbbx
1mju_H_881mju   H93102ANKLGWFPYWEEEETTEEEEbbbbeabxbb
1mpg_A_351mpg   A3847SLAVGEYRGVEEEETTEEEExbbbeaxbeb
1mug_A_1241mug   A127136TLTIGSTQIWEEEETTEEEEaxbbeaxxbb
1nij_A_2691nij   A273282FQGVQRLYSAEEEETTEEEEbbbbeabbbb
1nr0_A_4711nr0   A475484YKLSGASVSEEEEETTEEEEbxbbeabbbx
1oac_A_3221oac   A322331MIHWRNWDFHEEEETTEEEExbbbeaxbbb
1onk_B_1511onk   B153162MESNGGSVWVEEEETTEEEEpbxbeabbbb
1q0r_A_31q0r   A514IVPSGDVELWEEEETTEEEExbwbeabbbx
1q2w_A_171q2w   A1928QVTCGTTTLNEEEETTEEEEbbbbeaxbbx
1r17_A_4031r17   A408417EYKTALSSVNEEEETTEEEEbbbbeabbbb
1r94_A_761r94   A7988FVKEGLNEGFEEEETTEEEEbbbbeabbex
1rc7_A_1831rc7   A187196EAKIKEYRTLEEEETTEEEEbbbbeaxbbb
1uct_A_371uct   A4150MIIKNSTYREEEEETTEEEEbbbbeabbbx
1usr_A_4241usr   A429438MTVSNKTATLEEEETTEEEEbbbbeabbbb
2hft_*_1312hft   -133142LVRRNNTFLSEEEETTEEEEaxbbeabbxx
2shp_A_3772shp   A377386LKEYGVMRVREEEETTEEEEbbbbeabbbb
4lip_D_1964lip   D196205TETVGGNTHLEEEETTEEEEbbbbeabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1azs_A_4321azs   A     FKPMETHYLPIPERAZINOFORSKOLIN L - 438
1azs_A_4321azs   A     FKPMETHYLPIPERAZINOFORSKOLIN C - 441
1azs_A_4321azs   A     FKPMETHYLPIPERAZINOFORSKOLIN Y - 443
1bxo_A_1921bxo   A     PP7METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE I - 211
1fao_A_1811fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE W - 181
1fao_A_1811fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE K - 182
1fao_A_1811fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE R - 184
1fao_A_1811fao   A     ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE Y - 195
1jqp_A_751jqp   A     NAGN-ACETYL-D-GLUCOSAMINE R - 89
1kjq_A_2621kjq   A     MGMAGNESIUM ION E - 267
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE E - 267
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE F - 269
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL D - 273
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL E - 274
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL V - 275
1kjq_A_2621kjq   A     EDO1,2-ETHANEDIOL I - 276
1kjq_A_2621kjq   A     MGMAGNESIUM ION S - 278
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE S - 278
1kjq_A_2621kjq   A     MGMAGNESIUM ION E - 279
1kjq_A_2621kjq   A     ADPADENOSINE-5'-DIPHOSPHATE E - 279
1lop_A_1411lop   A     NIT4-NITROANILINE D - 149
1mju_H_881mju   H     GOLGLYCEROL K - 95
1mju_H_881mju   H     GOLGLYCEROL L - 96
1mju_H_881mju   H     GOLGLYCEROL G - 97
1mju_H_881mju   H     GOLGLYCEROL W - 98
1r94_A_761r94   A     HGMERCURY (II) ION V - 80
1r94_A_761r94   A     HGMERCURY (II) ION E - 82
1r94_A_761r94   A     HGMERCURY (II) ION N - 85
1r94_A_761r94   A     HGMERCURY (II) ION E - 86
1r94_A_761r94   A     HGMERCURY (II) ION G - 87
1r94_A_761r94   A     HGMERCURY (II) ION F - 88
1r94_A_761r94   A     HGMERCURY (II) ION K - 89
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1azs_A_4321azs   A MGBMG BINDING SITE IN ACTIVE SITE OF ADENYLYL CYCLASE.D - 440

Clusters included in this Subclass
CLUSTER: HA.1.21
CLUSTER: HA.1.34
CLUSTER: HA.1.47
CLUSTER: HA.1.68
CLUSTER: HA.2.193
CLUSTER: HA.2.34
CLUSTER: HA.2.42
CLUSTER: HA.2.62
CLUSTER: HA.3.155
CLUSTER: HA.3.190
CLUSTER: HA.3.49