Information on SUBCLASS 2.8.3 |
Subclass Accession number: 6159
Subclass: 2.8.3 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>50 %) |
Number of loops: 3 Average sequence ID (%) : 20.0 +/- 15.5 Average RMSD (Å) : 0.867 +/- 0.153 Consensus geometry
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Consensus Sequence: | XhpXpY |
(φψ)-conformation: | bbpgbb |
Pattern: | x | x | x | [GKT] | [GY] | [DHS] | [GT] | [RY] | [Y] | x |
Conservation: | -0.693 | -0.525 | -0.581 | -0.581 | 0.102 | -0.131 | 0.058 | 0.420 | 2.623 | -0.693 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b24_A_70 | 1b24 | A | 70 | 79 | QIVKGDTRYE | EEEE-SS-EE | bbbbxxgbbb |
1kjo_A_17 | 1kjo | A | 20 | 29 | INTTYSTYYY | EEEEESSSEE | bxbbbbgbbb |
1mfa_*_342 | 1mfa | - | 346 | 355 | CTRGGHGYYG | EEEEETTEEE | xbxbbxvbab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b24_A_70 | 1b24 | A | MSESELENOMETHIONINE | L - 80 |
1b24_A_70 | 1b24 | A | MSESELENOMETHIONINE | V - 82 |
1mfa_*_342 | 1mfa | * | MMAO1-METHYL-MANNOSE | G - 350 |
1mfa_*_342 | 1mfa | * | ABEABEQUOSE | G - 350 |
1mfa_*_342 | 1mfa | * | MMAO1-METHYL-MANNOSE | H - 351 |
1mfa_*_342 | 1mfa | * | ABEABEQUOSE | H - 351 |
1mfa_*_342 | 1mfa | * | MMAO1-METHYL-MANNOSE | G - 352 |
1mfa_*_342 | 1mfa | * | ABEABEQUOSE | G - 352 |
1mfa_*_342 | 1mfa | * | ABEABEQUOSE | Y - 353 |
1mfa_*_342 | 1mfa | * | ABEABEQUOSE | Y - 354 |
Clusters included in this Subclass |
CLUSTER: HA.3.152 |