Information on SUBCLASS 3.13.1 |
Subclass Accession number: 603
Subclass: 3.13.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) 4.1 (>75 %) 4.1.1 (>75 %) 4.1.1.49 SCOP : 53794 (>75 %) 53795 (>75 %) 53796 (>75 %) |
Number of loops: 10 Average sequence ID (%) : 20.5 +/- 17.8 Average RMSD (Å) : 0.650 +/- 0.085 Consensus geometry
|
Consensus Sequence: | XXGXcXh |
(φψ)-conformation: | bbeplbb |
Pattern: | x | x | x | [G] | x | [DGNR] | x | x | x |
Conservation: | -1.000 | -0.534 | -0.533 | 2.137 | -0.496 | 0.366 | -0.617 | -0.324 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eex_A_507 | 1eex | A | 507 | 515 | IIVGDGQVL | EEETTTEEE | bbbexvxxb |
1ei5_A_465 | 1ei5 | A | 465 | 473 | YSVGSDVWL | EEEETTEEE | bxaepvbbb |
1j1l_A_15 | 1j1l | A | 16 | 24 | QSEGVGARV | EEETBTEEE | bxbebvbbb |
1jj2_Y_47 | 1jj2 | Y | 48 | 56 | KRAGTGIWM | EEEETTEEE | bxaexvbbb |
1jk4_A_60 | 1jk4 | A | 60 | 67 | .PCGSGGRC | .EETTTEEE | .wbexlxbx |
1jqb_A_1002 | 1jqb | A | 1005 | 1013 | AMLGINKLG | EEEETTEEE | bxaepvbbe |
1mwv_A_219 | 1mwv | A | 219 | 225 | .YSGDRQL. | .EETTTEE. | .bbexlxx. |
1pe1_A_1156 | 1pe1 | A | 1156 | 1164 | TTFGYNNLV | EE-STT-EE | bpbexlbbb |
1pqm_A_25 | 1pqm | A | 25 | 32 | YTIGIGHL. | EEEETTEE. | xbbebvxx. |
1v8c_A_111 | 1v8c | A | 111 | 119 | TREGEGVYR | EEEETTEEE | bxaexvbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j1l_A_15 | 1j1l | A | MSESELENOMETHIONINE | V - 20 |
1jj2_Y_47 | 1jj2 | Y | CDCADMIUM ION | L - 47 |
1jj2_Y_47 | 1jj2 | Y | CDCADMIUM ION | C - 57 |
Clusters included in this Subclass |
CLUSTER: HA.1.59 |
CLUSTER: HA.2.49 |
CLUSTER: HA.4.86 |