Information on SUBCLASS 3.16.1 |
Subclass Accession number: 606
Subclass: 3.16.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 48726 (>75 %) 48727 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 11.0 +/- 14.3 Average RMSD (Å) : 0.557 +/- 0.098 Consensus geometry
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Consensus Sequence: | XXhXXph |
(φψ)-conformation: | bbeaNbb |
Pattern: | x | x | x | [CGL] | x | [adkns] | [EGRST] | [flpvy] | [amtv] | x |
Conservation: | -0.432 | -1.257 | -0.241 | 2.086 | -0.539 | 0.149 | 0.748 | -0.361 | 0.875 | -1.029 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bg2_*_32 | 1bg2 | - | 32 | 41 | KFQGEDTVVI | EEETTTEEEE | bbbeaNbbbb |
1g0u_1_34 | 1g0u | 1 | 35 | 44 | IPVGDNTVVG | EE-TTSEEEE | bwbeaNbbbx |
1h16_A_414 | 1h16 | A | 415 | 424 | AIACCVSPMI | EEETTTEEEE | bxxeaNbwbx |
1i5p_A_381 | 1i5p | A | 383 | 392 | DREGVATSTN | EEETTTEEEE | bbbeaNxbbx |
1o26_A_1 | 1o26 | A | 3 | 12 | IDILDKGFVE | EEETTTEEEE | bxbeaNxbbb |
1q4g_A_46 | 1q4g | A | 48 | 57 | VRFGLDRYQC | EEETTTEEEE | bxbeaNxbbb |
3ezm_A_58 | 3ezm | A | 62 | 71 | QLAGSSELAA | EEETTTEEEE | bxxeaNxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | A - 417 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | C - 418 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | C - 419 |
1h16_A_414 | 1h16 | A | PYRPYRUVIC ACID | S - 421 |
1q4g_A_46 | 1q4g | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 55 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h16_A_414 | 1h16 | A | PYRPYR BINDING SITE FOR CHAIN A | C - 418 |
Clusters included in this Subclass |
CLUSTER: HA.3.74 |