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Information on SUBCLASS 3.20.1
Subclass Accession number: 6218
Subclass: 3.20.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 42.2 +/- 24.4
Average RMSD (Å) : 0.800 +/- 0.346

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXpPLXX
(φψ)-conformation: bblwpbb
Pattern: [CF][TV][MY][GV][TW][NT]x[DE][P][L]xx[LY][HY][I]
Conservation:-0.017-0.399-0.189-1.0830.190-0.099-1.3310.5342.4510.660-1.198-0.955-0.3201.0950.660
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h4g_A_661h4g   A8397CVYGWTVDPLVEYYIEEEEEEETTTEEEEEbxbebbblwxbbbbb
1h72_C_1501h72   C150164FTMVTNYEPLEVLHIEEEEEETTTTEEEEEbbbxabblwxbbbbb
1igo_A_791igo   A8397CVYGWTKDPLTEYYIEEEEEEETTTEEEEEbbbbbbblwxbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h4g_A_661h4g   A     FXP1,2,-DEOXY-2-FLUORO-4-O-BETA-D-XYLOPYRANOSYL-BETA-D-XYLOPYRANOSE Y - 85
1h4g_A_661h4g   A     FXP1,2,-DEOXY-2-FLUORO-4-O-BETA-D-XYLOPYRANOSYL-BETA-D-XYLOPYRANOSE W - 87
1h4g_A_661h4g   A     FXP1,2,-DEOXY-2-FLUORO-4-O-BETA-D-XYLOPYRANOSYL-BETA-D-XYLOPYRANOSE E - 94
1h4g_A_661h4g   A     FXP1,2,-DEOXY-2-FLUORO-4-O-BETA-D-XYLOPYRANOSYL-BETA-D-XYLOPYRANOSE Y - 96
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h4g_A_661h4g   A FXBFXP BINDING SITE FOR CHAIN BY - 85

Clusters included in this Subclass
CLUSTER: HA.4.163