Information on SUBCLASS 3.22.1 |
Subclass Accession number: 6221
Subclass: 3.22.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 10.9 +/- 13.4 Average RMSD (Å) : 0.640 +/- 0.207 Consensus geometry
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Consensus Sequence: | hcpXGhh |
(φψ)-conformation: | bbaggbb |
Pattern: | [gmpt] | [AIKT] | [afg] | [dky] | [DSTWY] | [GNQR] | [AG] | x | [cgpy] | x | x |
Conservation: | -0.894 | -0.124 | -0.404 | -0.366 | -0.384 | 0.291 | 2.729 | 0.313 | -0.928 | -0.452 | 0.218 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1am5_*_274 | 1am5 | - | 274 | 284 | YIEGDQAFCTS | HEEESSS-EEE | abbbavvbbbx |
1im3_D_72 | 1im3 | D | 76 | 86 | PKADYGGVGEN | EEEESSS-EEE | wbxbavgbbbx |
1l0l_E_87 | 1l0l | E | 87 | 97 | MAFKWRGKPLF | EEEESSSSEEE | bbbbagvbpbb |
1xnd_*_6 | 1xnd | - | 6 | 16 | GTGYSNGYYYS | EEEESSS-EEE | ebebaSvbxbb |
2dap_*_244 | 2dap | - | 250 | 260 | TTGDTGGFNHT | EEEESSS-EEE | bbbbagvbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2dap_*_244 | 2dap | * | API2,6-DIAMINOPIMELIC ACID | H - 244 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
2dap_*_244 | 2dap | * | DAPDIAMINOPIMELATE BINDING SITE. | H - 244 |
Clusters included in this Subclass |
CLUSTER: HA.3.138 |