Information on SUBCLASS 3.3.1 |
Subclass Accession number: 580
Subclass: 3.3.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 35 Average sequence ID (%) : 17.5 +/- 18.1 Average RMSD (Å) : 0.486 +/- 0.163 Consensus geometry
|
Consensus Sequence: | XpXGXpX |
(φψ)-conformation: | bbagabb |
Pattern: | x | [cdhnrstwy] | [adegnst] | [dgkr] | [dehknprst] | [aeknqrst] | x | x |
Conservation: | -0.582 | -0.282 | 0.079 | 2.403 | -0.507 | -0.083 | -0.581 | -0.446 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a79_A_37 | 1a79 | A | 37 | 44 | NVEGNFLS | EE-SS-EE | bxaGabbb |
1a9x_A_760 | 1a9x | A | 767 | 774 | ICDGEMVL | EE-SS-EE | bbagabbb |
1aya_A_57 | 1aya | A | 57 | 64 | QNTGDYYD | EE-SS-EE | xbagabbb |
1bj7_*_97 | 1bj7 | - | 104 | 111 | NYDGERIT | EE-SS-EE | bbavabxb |
1e54_A_199 | 1e54 | A | 212 | 219 | YNFGVAKL | EE-SS-EE | bxaGabbb |
1euv_B_23 | 1euv | B | 28 | 35 | VSDGSSEI | EESSS-EE | bbagabbb |
1f3v_A_59 | 1f3v | A | 65 | 72 | HRSDPQLI | EE-SSSEE | xxavwxbb |
1f8e_A_179 | 1f8e | A | 183 | 190 | CHDGKTRM | EE-SSSEE | bbagabbb |
1g29_1_257 | 1g29 | 1 | 258 | 265 | VDFGEFRL | EE-SS-EE | bbagabbb |
1h98_A_25 | 1h98 | A | 26 | 33 | YDGGDQFY | EE-SSSEE | bxaGabxb |
1i4u_A_48 | 1i4u | A | 57 | 64 | SFDGKQFV | EE-SS-EE | bbavabbx |
1ii7_A_236 | 1ii7 | A | 239 | 246 | EWDGIKFK | EE-SSSEE | bxagabxx |
1ijq_A_379 | 1ijq | A | 382 | 389 | FTNRHEVR | EE-BSSEE | bxaGabbx |
1ik9_A_31 | 1ik9 | A | 36 | 43 | LTDGHSAW | EE-SS-EE | bbavabbb |
1io7_A_14 | 1io7 | A | 15 | 22 | YYDGNIWQ | EE-SS-EE | bbagabxb |
1iwl_A_57 | 1iwl | A | 60 | 67 | VSDGKTLW | EEESSEEE | bbagabbb |
1iwm_A_166 | 1iwm | A | 169 | 176 | LTDGGQRI | EE-SS-EE | bbagaxbb |
1j0h_A_519 | 1j0h | A | 524 | 531 | KTDGDETV | EE-SS-EE | bbavabbb |
1j31_A_133 | 1j31 | A | 134 | 141 | FDIGFAKV | EE-SS-EE | bxaGabbb |
1jd0_A_56 | 1jd0 | A | 60 | 67 | TNNGHSVK | EE-SSSEE | bxavabbb |
1k32_A_275 | 1k32 | A | 279 | 286 | NTDGRRIL | EESSS-EE | bbavabbb |
1kfw_A_376 | 1kfw | A | 379 | 386 | RYDGTQWW | EE-SS-EE | bbagaxbb |
1kjo_A_113 | 1kjo | A | 114 | 121 | FWNGSQMV | EE-SSSEE | bbavabxb |
1kny_A_63 | 1kny | A | 68 | 75 | WTTGEWKV | EE-SS-EE | bbagabbb |
1kop_A_60 | 1kop | A | 62 | 69 | ENNGHTIQ | EE-SS-EE | bbavabbb |
1kqf_A_798 | 1kqf | A | 799 | 806 | QWNGSKWT | EE-SSSEE | bxagNbxb |
1llf_A_15 | 1llf | A | 15 | 22 | LNAIINEA | EE-SS-EE | bxagabbb |
1lmi_A_116 | 1lmi | A | 119 | 126 | MNNGMEDL | EE-SSSEE | bbagabxa |
1md6_A_98 | 1md6 | A | 102 | 109 | RDMGLTSS | EE-SS-EE | bxaeabbb |
1n7o_A_664 | 1n7o | A | 671 | 678 | FMLKDKIA | EE-SS-EE | bxaGabbx |
1nsc_A_177 | 1nsc | A | 181 | 188 | CHDGREWT | EE-SS-EE | bbagabxb |
1p8x_A_671 | 1p8x | A | 674 | 681 | LDTWDQVF | EE-SS-EE | bbaGabbx |
1ps9_A_9 | 1ps9 | A | 9 | 16 | LDLGFTTL | EE-SS-EE | bxagabbx |
1ug9_A_55 | 1ug9 | A | 62 | 69 | VSDGTSAQ | EE-SS-EE | bbagabbb |
1v8a_A_169 | 1v8a | A | 171 | 178 | VSDGRRTF | EE-SS-EE | bbagabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h98_A_25 | 1h98 | A | FS4CYSTEINE RESIDUES 20, 39, 42 AND 45 COORDINATE THE FS4 | I - 34 |
Clusters included in this Subclass |
CLUSTER: HA.3.24 |
CLUSTER: HA.4.13 |