Information on SUBCLASS 3.5.5 |
Subclass Accession number: 6189
Subclass: 3.5.5 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 10.3 +/- 11.0 Average RMSD (Å) : 1.033 +/- 0.289 Consensus geometry
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Consensus Sequence: | XXGXpXX |
(φψ)-conformation: | bbeaabb |
Pattern: | [AET] | x | [LMP] | x | [LTY] | [G] | [FIK] | [DNT] | [GQ] | [TWY] | [EKL] | [ACL] | [DHT] |
Conservation: | -0.312 | -0.389 | -0.312 | -0.698 | -0.466 | 3.083 | -0.852 | 0.228 | 0.271 | 0.382 | -0.621 | -0.080 | -0.235 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acc_*_381 | 1acc | - | 381 | 393 | TSLVLGKNQTLAT | EEEEETTTEEEEE | bbxbbeaaxxabb |
1cvu_A_46 | 1cvu | A | 46 | 58 | ECMSTGFDQYKCD | EEEEEETTEEEEE | xxbxaeaabbbbx |
1n71_A_55 | 1n71 | A | 62 | 74 | AIPQYGITGWELH | EEEEETTTEEEEE | bbwabeaabbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cvu_A_46 | 1cvu | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 55 |
1n71_A_55 | 1n71 | A | COACOENZYME A | L - 73 |
1n71_A_55 | 1n71 | A | COACOENZYME A | L - 76 |
1n71_A_55 | 1n71 | A | COACOENZYME A | V - 77 |
1n71_A_55 | 1n71 | A | COACOENZYME A | V - 78 |
Clusters included in this Subclass |
CLUSTER: HA.2.135 |