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Information on SUBCLASS 4.1.14
Subclass Accession number: 6249
Subclass: 4.1.14 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 10.4 +/- 11.8
Average RMSD (Å) : 0.487 +/- 0.125

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hcXXpXXX
(φψ)-conformation: bbaaalbb
Pattern: [gikltv]x[CFGITV][DNS]x[adtv][DEKRSTY][DEGKR][filtvy]xx[HILVWY]
Conservation:-0.578-0.391-0.2772.941-0.667-0.152-0.0040.485-0.148-0.556-0.8470.194
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1k3p_A_571k3p   A5768TFIDGDEGILLHEEEETTTTEEEEbbbbaaalxbbb
1lgy_A_511lgy   A5566TFTSLLSDTNGYEEEETTTTEEEEbbbbaaalxbbb
1lml_*_5061lml   -513524VQCDTATRTYSVEEEETTTTEEEEbbbxaaalbbbb
1luz_A_621luz   A6879IRVDYTKGYIDVEEEETTTTEEEEabbbaaavbbbb
1mjc_*_51mjc   -1021KWFNADKGFGFIEEEETTTTEEEEabbxaaavbbbb
1npe_A_9401npe   A953964LAFDCVDKVVYWEEEETTTTEEEEbbbxaaavbxbb
1oxd_A_251oxd   A3344GEGDATYGKLTLEEEEGGGTEEEEebbbaaalbbbb
5rub_A_705rub   A7283YEVDEARELTKIEEEETTTTEEEEabbbaaalbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1luz_A_621luz   A     MSESELENOMETHIONINE T - 62
1luz_A_621luz   A     MSESELENOMETHIONINE V - 63
1luz_A_621luz   A     MSESELENOMETHIONINE K - 64
1luz_A_621luz   A     MSESELENOMETHIONINE Y - 81
1npe_A_9401npe   A     CDCADMIUM ION A - 941
1npe_A_9401npe   A     CDCADMIUM ION L - 943
1npe_A_9401npe   A     CDCADMIUM ION H - 944
1oxd_A_251oxd   A     NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE L - 42
1oxd_A_251oxd   A     NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE L - 44
1oxd_A_251oxd   A     NYC(5Z)-5-(1H-INDOL-3-YLMETHYLENE)-4H-IMIDAZOL-4-ONE F - 46

Clusters included in this Subclass
CLUSTER: HA.3.118
CLUSTER: HA.5.88