|
|
|
|
|
|
|
| Information on SUBCLASS 4.1.17 |
|
Subclass Accession number: 7882
Subclass: 4.1.17 
Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: 
 Consensus coordinates:
|
Number of loops: 2 Average sequence ID (%) : 17.4 +/- 0.0 Average RMSD (Å) : 1.300 +/- 0.000 Consensus geometry
|
| Consensus Sequence: | YcXpTpph |
| (φψ)-conformation: | bbaaalbb |
| Pattern: | [GI] | x | x | [LY] | [KT] | [Y] | [DN] | [KV] | [KS] | [T] | [DR] | [KT] | [LV] | [ET] | [EK] | [PV] | [KV] | [DN] | x | [L] | [AT] | [DG] | [L] |
| Conservation: | -1.329 | -1.162 | -0.828 | -0.160 | -0.327 | 3.013 | 0.675 | -0.828 | -0.160 | 1.677 | -0.494 | -0.327 | 0.007 | -0.327 | 0.341 | -0.494 | -0.828 | 0.675 | -0.995 | 1.009 | -0.160 | 0.007 | 1.009 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1cru_A_112 | 1cru | A | 116 | 138 | IRRYTYNKSTDTLEKPVDLLAGL | EEEEEEETTTTEEEEEEEEEEEE | xbbbbxbaaalbbblwbxabbvx |
| 1k32_A_617 | 1k32 | A | 617 | 639 | GVLLKYDVKTRKVTEVKNNLTDL | EEEEEEETTT--EEEEEEEEEEE | bbxbbbxaaavxbbxabblxabb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1cru_A_112 | 1cru | A | GOLGLYCEROL | D - 126 |
| Clusters included in this Subclass |
| CLUSTER: HA.4.54 |
| For any comment or web-related incidence, send an email to the webmaster. |
|