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Information on SUBCLASS 4.1.19
Subclass Accession number: 6254
Subclass: 4.1.19 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 7.8 +/- 8.8
Average RMSD (Å) : 0.967 +/- 0.306

Consensus geometry
d (Å): 3 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hXXppXpX
(φψ)-conformation: bbaaalbb
Pattern: [ALM][FHI][DST]x[IVW][DNV][MTV][KNT][HN]x[KRT]x[EFY][QST][AT][IY]x
Conservation:-0.178-0.5480.069-1.165-0.178-1.041-0.055-0.0552.6411.1740.069-1.658-0.055-0.0551.1430.561-0.671
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h4u_A_4211h4u   A428444LHSYVVMNHGRSYTAISEEEEEETTTTEEEEEEEbbbbbbaaalxbbbbbx
1ppy_A_431ppy   A4359AIDIWNVTNGKRFSTYAEEEEEETTT--EEEEEExbbbbxaaavxbbbbbx
1r17_A_4331r17   A438454MFTNIDTKNHTVEQTIYEEEEEETTTTEEEEEEEbxabbbaaalbbbbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ppy_A_431ppy   A     CSXS-OXY CYSTEINE N - 48
1ppy_A_431ppy   A     CSXS-OXY CYSTEINE N - 51
1ppy_A_431ppy   A     CSXS-OXY CYSTEINE G - 52
1ppy_A_431ppy   A     CSXS-OXY CYSTEINE K - 53
1ppy_A_431ppy   A     CSXS-OXY CYSTEINE R - 54
1ppy_A_431ppy   A     CSXS-OXY CYSTEINE F - 55

Clusters included in this Subclass
CLUSTER: HA.5.249