Information on SUBCLASS 4.1.19 |
Subclass Accession number: 6254
Subclass: 4.1.19 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.8 +/- 8.8 Average RMSD (Å) : 0.967 +/- 0.306 Consensus geometry
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Consensus Sequence: | hXXppXpX |
(φψ)-conformation: | bbaaalbb |
Pattern: | [ALM] | [FHI] | [DST] | x | [IVW] | [DNV] | [MTV] | [KNT] | [HN] | x | [KRT] | x | [EFY] | [QST] | [AT] | [IY] | x |
Conservation: | -0.178 | -0.548 | 0.069 | -1.165 | -0.178 | -1.041 | -0.055 | -0.055 | 2.641 | 1.174 | 0.069 | -1.658 | -0.055 | -0.055 | 1.143 | 0.561 | -0.671 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h4u_A_421 | 1h4u | A | 428 | 444 | LHSYVVMNHGRSYTAIS | EEEEEETTTTEEEEEEE | bbbbbbaaalxbbbbbx |
1ppy_A_43 | 1ppy | A | 43 | 59 | AIDIWNVTNGKRFSTYA | EEEEEETTT--EEEEEE | xbbbbxaaavxbbbbbx |
1r17_A_433 | 1r17 | A | 438 | 454 | MFTNIDTKNHTVEQTIY | EEEEEETTTTEEEEEEE | bxabbbaaalbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ppy_A_43 | 1ppy | A | CSXS-OXY CYSTEINE | N - 48 |
1ppy_A_43 | 1ppy | A | CSXS-OXY CYSTEINE | N - 51 |
1ppy_A_43 | 1ppy | A | CSXS-OXY CYSTEINE | G - 52 |
1ppy_A_43 | 1ppy | A | CSXS-OXY CYSTEINE | K - 53 |
1ppy_A_43 | 1ppy | A | CSXS-OXY CYSTEINE | R - 54 |
1ppy_A_43 | 1ppy | A | CSXS-OXY CYSTEINE | F - 55 |
Clusters included in this Subclass |
CLUSTER: HA.5.249 |