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Information on SUBCLASS 4.1.9
Subclass Accession number: 7874
Subclass: 4.1.9 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 14.3 +/- 16.3
Average RMSD (Å) : 0.857 +/- 0.310

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXXpXph
(φψ)-conformation: bbaaalbb
Pattern: x[flv]x[CFLV]xx[DENS]xx[knrst][degrs][AERT][acfly][itvy][AGL][IMTV][ADGK]
Conservation:-0.7530.101-1.0450.892-0.424-0.4772.494-1.448-0.102-0.242-0.8620.326-0.762-0.2510.3731.6960.483
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fot_A_1001fot   A100116RVHLIRSRHNGRYYAMKEEEEEEETTT--EEEEExbbxbbxaaalxbbbxx
1g8k_B_1041g8k   B104120RVLLRYDAASDALTAVGEEEEEEETTTTEEEEEExxxbbbbaaavxbbxab
1h1w_A_951h1w   A95111TVVLARELATSREYAIKEEEEEEETTT--EEEEEbxbxbbxaaavxbbxxx
1hs6_A_161hs6   A2238HLRCSVDFTRRTLTGTAEEEEEEETTTTEEEEEEbbbbbxxaaalbbbebb
1ia8_A_221ia8   A2238EVQLAVNRVTEEAVAVKEEEEEEETTT--EEEEEbbbxbbxaaavxbbbbx
1jof_A_151jof   A1632IFTVQFDDEKLTCKLIKEEEEEEETTTTEEEEEEbbbbbbxaaalbbbxab
1nuw_A_11801nuw   A11811197VNCFMLDPAIGEFILVDEEEEEEETTTTEEEEEEbbbbxxxaaavbxbpab
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h1w_A_951h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 95
1h1w_A_951h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE V - 96
1h1w_A_951h1w   A     GOLGLYCEROL L - 102
1h1w_A_951h1w   A     GOLGLYCEROL A - 103
1h1w_A_951h1w   A     GOLGLYCEROL T - 104
1h1w_A_951h1w   A     GOLGLYCEROL S - 105
1h1w_A_951h1w   A     GOLGLYCEROL R - 106
1h1w_A_951h1w   A     GOLGLYCEROL E - 107
1h1w_A_951h1w   A     GOLGLYCEROL Y - 108
1h1w_A_951h1w   A     GOLGLYCEROL A - 109
1h1w_A_951h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE A - 109
1h1w_A_951h1w   A     GOLGLYCEROL K - 111
1h1w_A_951h1w   A     ATPADENOSINE-5'-TRIPHOSPHATE K - 111
1h1w_A_951h1w   A     GOLGLYCEROL I - 112
1h1w_A_951h1w   A     GOLGLYCEROL L - 113
1hs6_A_161hs6   A     YBYTTERBIUM (III) ION R - 31
1hs6_A_161hs6   A     YBYTTERBIUM (III) ION T - 33
1hs6_A_161hs6   A     YBYTTERBIUM (III) ION T - 35
1jof_A_151jof   A     MSESELENOMETHIONINE A - 15
1jof_A_151jof   A     MSESELENOMETHIONINE I - 16
1jof_A_151jof   A     MSESELENOMETHIONINE F - 17
1jof_A_151jof   A     MSESELENOMETHIONINE T - 18
1jof_A_151jof   A     MSESELENOMETHIONINE V - 19
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h1w_A_951h1w   A AC7GOL BINDING SITE FOR CHAIN AS - 105
1h1w_A_951h1w   A AC5GOL BINDING SITE FOR CHAIN AR - 106
1h1w_A_951h1w   A AC5GOL BINDING SITE FOR CHAIN AE - 107
1h1w_A_951h1w   A AC5GOL BINDING SITE FOR CHAIN AY - 108
1h1w_A_951h1w   A BC6ATP BINDING SITE FOR CHAIN AA - 109
1h1w_A_951h1w   A AC8GOL BINDING SITE FOR CHAIN AK - 111

Clusters included in this Subclass
CLUSTER: HA.4.34