Information on SUBCLASS 4.12.1 |
Subclass Accession number: 6294
Subclass: 4.12.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 12.5 +/- 14.8 Average RMSD (Å) : 0.600 +/- 0.267 Consensus geometry
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Consensus Sequence: | XXpXXcXh |
(φψ)-conformation: | bbabpgbb |
Pattern: | [ckqrsy] | [eknpqrs] | x | [DEGKNQ] | x | [dkpqt] | [dgn] | x | [avwy] | x | [filv] |
Conservation: | -0.980 | -0.189 | -1.241 | 1.128 | -1.267 | 0.101 | 1.192 | -0.147 | 1.070 | -0.817 | 1.150 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bg6_*_140 | 1bg6 | - | 142 | 152 | CRSERPGQVTV | EE-SSTTEEEE | bbbabpgbbxb |
1fkn_A_283 | 1fkn | A | 287 | 297 | LMGEVTNQSFR | EE-SSTTEEEE | bpxaxpvbbbb |
1g3q_A_74 | 1g3q | A | 74 | 84 | YMTQFDNVYVL | EE-SSTTEEEE | bxbabpvbbbb |
1g8a_A_3 | 1g8a | A | 5 | 15 | KKHKFPGVYTV | EE-SSTTEEEE | bxxaxpvbbbb |
1jqz_A_44 | 1jqz | A | 46 | 56 | LSAESVGEVYI | EEESSTTEEEE | xbbabpvbbbb |
1kxv_C_67 | 1kxv | C | 70 | 80 | SQGNAKNTAYL | EE-SSTTEEEE | bxxabplbbbb |
1m61_A_187 | 1m61 | A | 190 | 200 | RPRKEQGTYAL | EE-SSTTEEEE | bxbapxvbbbx |
1mzu_A_102 | 1mzu | A | 110 | 120 | QNAGVPDRYWI | EE-SSTTEEEE | bxbaxxvbbbb |
1pue_E_243 | 1pue | E | 244 | 254 | KKVKKKLTYQF | EE-SSTTEEEE | bxbabpvbbbx |
1upi_A_2 | 1upi | A | 4 | 14 | RELDVPGAWEI | EE-SSTTEEEE | bxxaxpvbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mzu_A_102 | 1mzu | A | HC44'-HYDROXYCINNAMIC ACID | V - 122 |
Clusters included in this Subclass |
CLUSTER: HA.4.52 |