Information on SUBCLASS 4.29.1 |
Subclass Accession number: 6316
Subclass: 4.29.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 16.1 +/- 16.8 Average RMSD (Å) : 0.700 +/- 0.405 Consensus geometry
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Consensus Sequence: | XppGpcXh |
(φψ)-conformation: | bbalagbb |
Pattern: | [CFIKT] | [dty] | [adn] | [GN] | [DNRY] | [EGK] | [DGNTV] | [actv] | [STWY] | [acftv] | [fklt] | [fikl] |
Conservation: | -0.782 | -0.403 | 0.324 | 2.756 | 0.009 | 0.716 | -0.519 | -0.323 | 0.306 | -0.545 | -0.946 | -0.592 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cwv_A_652 | 1cwv | A | 652 | 663 | TDHNDGTYSAPL | EE-SSSEEEEEE | bxalagbbbbxb |
1g6o_A_45 | 1g6o | A | 49 | 60 | CYNGNKVVWVLK | EE-SSSEEEEEE | bbavavbbbbbx |
1i8n_A_38 | 1i8n | A | 39 | 50 | ITAGNEDCWSKR | EE-SSSEEEEEE | bbavavbbbbbb |
1je5_A_96 | 1je5 | A | 97 | 108 | FDNGDGTTTFKF | EE-SSSEEEEEE | bxavavbbbbbb |
1n7v_A_355 | 1n7v | A | 359 | 370 | KTDGYGGATCFI | EE-SSSEEEEEE | bbavavxbbbbb |
1qni_A_323 | 1qni | A | 327 | 338 | TFDGRGNAYTTL | EE-SSSEEEEEE | bbavagbbbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g6o_A_45 | 1g6o | A | MSESELENOMETHIONINE | I - 45 |
1g6o_A_45 | 1g6o | A | ADPADENOSINE-5'-DIPHOSPHATE | I - 45 |
1g6o_A_45 | 1g6o | A | ADPADENOSINE-5'-DIPHOSPHATE | T - 46 |
1g6o_A_45 | 1g6o | A | MSESELENOMETHIONINE | V - 58 |
1i8n_A_38 | 1i8n | A | ROPPROPIONAMIDE | I - 39 |
1i8n_A_38 | 1i8n | A | ROPPROPIONAMIDE | T - 40 |
1i8n_A_38 | 1i8n | A | ROPPROPIONAMIDE | A - 41 |
1i8n_A_38 | 1i8n | A | ROPPROPIONAMIDE | W - 47 |
1i8n_A_38 | 1i8n | A | ROPPROPIONAMIDE | K - 49 |
1n7v_A_355 | 1n7v | A | ACTACETATE ION | A - 356 |
1n7v_A_355 | 1n7v | A | ACTACETATE ION | Y - 358 |
1qni_A_323 | 1qni | A | CUZ(MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION | L - 324 |
1qni_A_323 | 1qni | A | CUZ(MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION | H - 325 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1qni_A_323 | 1qni | A | CUZCUZ CENTER (CATALYTIC SITE) | H - 325 |
Clusters included in this Subclass |
CLUSTER: HA.3.111 |