Logo
Information on SUBCLASS 4.38.1
Subclass Accession number: 6325
Subclass: 4.38.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 45.5 +/- 17.5
Average RMSD (Å) : 1.100 +/- 0.436

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXGNpGph
(φψ)-conformation: pbeabebb
Pattern: xxxxxxxxxxx
Conservation:-1.000-1.000-0.468-0.4681.2661.266-0.2201.266-0.839-0.468-1.335
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aqz_A_1301aqz   A135145AHQRGNQGDLREESBTTSS-EEbxabeabexbb
1bxs_A_3731bxs   A373381..PWGNKGYFI..EE-SSS-EE..xbeabebxb
1o9j_A_3731o9j   A373381..PWGNKGYFI..EESSSS-EE..xbeabebxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aqz_A_1301aqz   A     PO4PHOSPHATE ION H - 136
1aqz_A_1301aqz   A     PO4PHOSPHATE ION N - 140
1aqz_A_1301aqz   A     PO4PHOSPHATE ION Q - 141
1aqz_A_1301aqz   A     PO4PHOSPHATE ION G - 142
1aqz_A_1301aqz   A     PO4PHOSPHATE ION L - 144
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1aqz_A_1301aqz   A CA1THESE CATALYTIC RESIDUES ARE CLUSTERED AT THE OPEN END OF THE CLEFT AND THEIR SIDE CHAINS FORM EXTENSIVE HYDROGEN BONDING WITH AN ORGANIC PHOSPHATE GROUP FROM THE CRYSTALLIZATION BUFFER.H - 136

Clusters included in this Subclass
CLUSTER: HA.6.166