Information on SUBCLASS 4.7.1 |
Subclass Accession number: 7898
Subclass: 4.7.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 13.6 +/- 23.2 Average RMSD (Å) : 0.878 +/- 0.205 Consensus geometry
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Consensus Sequence: | pXccXXXX |
(φψ)-conformation: | bbllbpbb |
Pattern: | [filty] | [dqrt] | x | [dhn] | [DEGKN] | [ehknqrs] | [dkwy] | x | x | x |
Conservation: | 0.088 | 0.138 | -0.394 | 2.173 | 0.843 | -0.236 | -0.817 | -0.735 | -1.060 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dnl_A_200 | 1dnl | A | 205 | 214 | QRENDAWKID | EE-SSSEEEE | bxbllbbxbb |
1e2t_A_158 | 1e2t | A | 162 | 171 | FRHHEHWQSM | EESSSSEEEE | bxbvvbpbxa |
1gv4_A_561 | 1gv4 | A | 566 | 575 | YLRDKVVVGI | EESSSBEEEE | bbbgvbxabb |
1igr_A_164 | 1igr | A | 165 | 173 | TTINNEYNY. | EESSS-EEE. | bbbllbxbx. |
1nos_*_301 | 1nos | - | 303 | 312 | LQADGQDPEV | EE-TT---EE | bbblvxxxbx |
1om4_A_522 | 1om4 | A | 524 | 533 | LQANGNDPEL | EE-TT---EE | bbblvxxxbx |
1p4o_A_1136 | 1p4o | A | 1136 | 1144 | YRKGGKGLL. | EEGGGSSEE. | bxpvvbxxb. |
1tmo_*_421 | 1tmo | - | 422 | 430 | IDANGSKVV. | EE-SSSEEE. | bxblvbbbb. |
4nos_A_307 | 4nos | A | 309 | 318 | LQANGRDPEL | EE-TT---EE | bbblvxpxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dnl_A_200 | 1dnl | A | MSESELENOMETHIONINE | R - 201 |
1dnl_A_200 | 1dnl | A | PO4PHOSPHATE ION | F - 202 |
1dnl_A_200 | 1dnl | A | PO4PHOSPHATE ION | R - 215 |
Clusters included in this Subclass |
CLUSTER: HA.5.28 |