Information on SUBCLASS 5.1.7 |
Subclass Accession number: 6346
Subclass: 5.1.7 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 18.5 +/- 18.6 Average RMSD (Å) : 0.607 +/- 0.133 Consensus geometry
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Consensus Sequence: | XXpXpGpXX |
(φψ)-conformation: | bbpaagppb |
Pattern: | x | x | x | [ADGNST] | x | [DENQRS] | [GKN] | [knry] | x | [afilmtv] | x |
Conservation: | -0.833 | -0.933 | -0.584 | 0.563 | -0.483 | 0.769 | 2.342 | 0.668 | -0.387 | -0.214 | -0.909 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1arb_*_197 | 1arb | - | 197 | 207 | PIYSPEKRVLG | EEE-TTS-EEE | xbbxaavbxae |
1dtd_A_389 | 1dtd | A | 394 | 404 | IGSSFENRPMN | EEE-TT--EEE | aebxaavxxxb |
1e6y_B_2279 | 1e6y | B | 2282 | 2292 | DKTAPSGYNFY | EEE-TTS-EEE | abbxaavxxxx |
1e9i_A_9 | 1e9i | A | 10 | 20 | EIIDSRGNPTV | EEE-TTS-EEE | bbbxaavbwbx |
1ep5_A_229 | 1ep5 | A | 229 | 239 | PILDNQGRVVA | EEE-TTS-EEE | xbbxaavxxab |
1f89_A_109 | 1f89 | A | 114 | 124 | IIFNEDGKLID | EEE-TTS-EEE | xbbbaagxxab |
1io1_A_304 | 1io1 | A | 310 | 320 | SYTDNNGKTID | EEE-TTS-EEE | bbbxaavxbbx |
1itw_A_362 | 1itw | A | 362 | 372 | KMWGPDGKLHD | EEE-TTSSEEE | bbxbaavbxbx |
1k8w_A_290 | 1k8w | A | 295 | 305 | GEIDDEGRVAP | EEE-TTS-EEE | bbxxaavbpxw |
1m4l_A_33 | 1m4l | A | 38 | 48 | IGRSYEGRPIY | EEE-TTS-EEE | aebxaavxxbb |
1o1z_A_31 | 1o1z | A | 36 | 46 | VRLSKDGKVVV | EEE-TTS-EEE | bbbxaavxxbx |
1obr_*_30 | 1obr | - | 35 | 45 | IGKSYEGRELW | EEE-TTS-EEE | aebxaavxxxx |
1r18_A_195 | 1r18 | A | 200 | 210 | YDKDANGKVEM | EEE-TTS-EEE | bbbxaavxbbb |
2por_*_19 | 2por | - | 32 | 42 | SGTTDSGLEFG | EEE-TT--EEE | bbbxaavxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ep5_A_229 | 1ep5 | A | UREUREA | R - 236 |
1obr_*_30 | 1obr | * | CACALCIUM ION | K - 48 |
2por_*_19 | 2por | * | OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL | W - 19 |
2por_*_19 | 2por | * | OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL | N - 20 |
2por_*_19 | 2por | * | OTE2-{2-[2-(2-OCTYLOXY-ETHOXY)-ETHOXYL]-ETHOXY}ETHANOL | F - 21 |
Clusters included in this Subclass |
CLUSTER: HA.4.78 |
CLUSTER: HA.6.31 |