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Information on SUBCLASS 5.38.1
Subclass Accession number: 6418
Subclass: 5.38.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.2 (>75 %)  1.2.1 (>75 %)  1.2.1.3
GO : GO:0004028 (>75 %)  GO:0016620 (>75 %)  GO:0016903 (>75 %)  
SCOP : 53719 (>75 %)  53720 (>75 %)  53721 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 79.2 +/- -43.8
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: TIPhDGpFF
(φψ)-conformation: bbwppepbb
Pattern: [T][I][P][IMV][D][G][DEN][F][F][ST][Y][T][R][HS][E][P]
Conservation:0.020-0.5941.250-1.4820.6350.635-1.4820.6350.635-1.3771.2500.0200.020-1.4340.0201.250
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxs_A_1431bxs   A143158TIPMDGNFFTYTRSEPEE--SSSEEEEEEEEEbbwxxexbbbbbbxxx
1o04_A_1431o04   A143158TIPIDGDFFSYTRHEPEE--SSSEEEEEEEEEbbwxxexbbbbbbxbx
1o9j_A_1431o9j   A143158TIPVDGEFFSYTRHEPEE--SSSEEEEEEEEEbbwxpexbbbbbbxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o04_A_1431o04   A     GAIGUANIDINE I - 146
1o04_A_1431o04   A     GAIGUANIDINE D - 147
1o04_A_1431o04   A     GAIGUANIDINE G - 148
1o04_A_1431o04   A     GAIGUANIDINE D - 149
1o04_A_1431o04   A     GAIGUANIDINE F - 150
1o04_A_1431o04   A     EDO1,2-ETHANEDIOL F - 151
1o04_A_1431o04   A     EDO1,2-ETHANEDIOL Y - 153
1o04_A_1431o04   A     EDO1,2-ETHANEDIOL R - 155
1o04_A_1431o04   A     GAIGUANIDINE E - 157
1o04_A_1431o04   A     GAIGUANIDINE P - 158

Clusters included in this Subclass
CLUSTER: HA.6.188